The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 42: Polyketide synthase Pks13

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 6 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Transferase activity, transferring acyl groups other than amino-acyl groups GO:0016747
Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
6 O53579 (/IDA) O53579 (/IDA) O53579 (/IDA) O53579 (/IDA) O53579 (/IDA) Q9Y7D5 (/IDA)
3-oxoacyl-[acyl-carrier-protein] synthase activity GO:0004315
Catalysis of the reaction: acyl-
5 P9WQE1 (/IDA) P9WQE1 (/IDA) P9WQE1 (/IDA) P9WQE1 (/IDA) P9WQE1 (/IDA)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
5 O53579 (/IPI) O53579 (/IPI) O53579 (/IPI) O53579 (/IPI) O53579 (/IPI)
Catalytic activity GO:0003824
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
1 Q5LV53 (/ISS)
S-adenosylmethionine-dependent methyltransferase activity GO:0008757
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
1 Q9Y7D5 (/IDA)
Oxidoreductase activity GO:0016491
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
1 Q9Y7D5 (/IDA)

There are 17 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Lipid biosynthetic process GO:0008610
The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
8 P9WQE1 (/IMP) P9WQE1 (/IMP) P9WQE1 (/IMP) P9WQE1 (/IMP) P9WQE1 (/IMP) Q7TXL6 (/IMP) Q7TXL6 (/IMP) Q7TXL6 (/IMP)
Actinobacterium-type cell wall biogenesis GO:0071766
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall of the type found in Actinobacteria. The cell wall is the rigid or semi-rigid envelope lying outside the cell membrane. Actinobacterial cell walls contain characteristic mycolic acids, of which some are covalently linked to the cell wall peptidoglycan and others accumulate at the cell surface.
8 P9WQE1 (/IMP) P9WQE1 (/IMP) P9WQE1 (/IMP) P9WQE1 (/IMP) P9WQE1 (/IMP) Q7TXL6 (/IMP) Q7TXL6 (/IMP) Q7TXL6 (/IMP)
Fatty acid biosynthetic process GO:0006633
The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
5 P9WQE1 (/IDA) P9WQE1 (/IDA) P9WQE1 (/IDA) P9WQE1 (/IDA) P9WQE1 (/IDA)
Fatty acid elongation, saturated fatty acid GO:0019367
Elongation of a saturated fatty acid chain.
5 O53579 (/IDA) O53579 (/IDA) O53579 (/IDA) O53579 (/IDA) O53579 (/IDA)
Protein homooligomerization GO:0051260
The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
5 O53579 (/IPI) O53579 (/IPI) O53579 (/IPI) O53579 (/IPI) O53579 (/IPI)
Mycolic acid biosynthetic process GO:0071768
The chemical reactions and pathways resulting in the formation of mycolic acids, beta-hydroxy fatty acids with a long alpha-alkyl side chain.
5 O53579 (/IDA) O53579 (/IDA) O53579 (/IDA) O53579 (/IDA) O53579 (/IDA)
Mycolate cell wall layer assembly GO:0071769
The aggregation, arrangement and bonding together of a set of components, including arabinogalactan mycolate and trehalose dimycolate, to form the mycolate layer of the Actinobacterium-type cell wall. The mycolate layer is physically attached to the peptidoglycan layer.
5 O53579 (/IDA) O53579 (/IDA) O53579 (/IDA) O53579 (/IDA) O53579 (/IDA)
DIM/DIP cell wall layer assembly GO:0071770
The aggregation, arrangement and bonding together of a set of components, including (phenyl)phthiocerol, phthiodiolone, phthiotriol dimycocerosate and diphthioceranate, to form the DIM/DIP layer of the Actinobacterium-type cell wall.
5 P9WQE1 (/IDA) P9WQE1 (/IDA) P9WQE1 (/IDA) P9WQE1 (/IDA) P9WQE1 (/IDA)
Polyketide biosynthetic process GO:0030639
The chemical reactions and pathways resulting in the formation of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones, which are themselves formed by repetitive head-to-tail addition of acetyl (or substituted acetyl) units indirectly derived from acetate (or a substituted acetate) by a mechanism similar to that for fatty acid biosynthesis but without the intermediate reductive steps.
3 Q48HQ2 (/IGC) Q48HQ2 (/IGC) Q48HQ2 (/IGC)
Nonribosomal peptide biosynthetic process GO:0019184
The biosynthetic process in which peptide bond formation occurs in the absence of the translational machinery. Examples include the synthesis of antibiotic peptides, and glutathione.
1 Q5LV53 (/ISS)
Secondary metabolic process GO:0019748
The chemical reactions and pathways resulting in many of the chemical changes of compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. In multicellular organisms secondary metabolism is generally carried out in specific cell types, and may be useful for the organism as a whole. In unicellular organisms, secondary metabolism is often used for the production of antibiotics or for the utilization and acquisition of unusual nutrients.
1 Q5BEJ4 (/NAS)
Polyketide biosynthetic process GO:0030639
The chemical reactions and pathways resulting in the formation of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones, which are themselves formed by repetitive head-to-tail addition of acetyl (or substituted acetyl) units indirectly derived from acetate (or a substituted acetate) by a mechanism similar to that for fatty acid biosynthesis but without the intermediate reductive steps.
1 Q9Y7D5 (/IDA)
Methylation GO:0032259
The process in which a methyl group is covalently attached to a molecule.
1 Q9Y7D5 (/IDA)
S-adenosylmethionine metabolic process GO:0046500
The chemical reactions and pathways involving S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.
1 Q9Y7D5 (/IDA)
NADPH oxidation GO:0070995
A metabolic process that results in the oxidation of reduced nicotinamide adenine dinucleotide, NADPH, to the oxidized form, NADP.
1 Q9Y7D5 (/IDA)
Asperfuranone biosynthetic process GO:1900554
The chemical reactions and pathways resulting in the formation of asperfuranone.
1 Q5BEJ4 (/IMP)
Malonyl-CoA metabolic process GO:2001293
The chemical reactions and pathways involving malonyl-CoA, the S-malonyl derivative of coenzyme A.
1 Q9Y7D5 (/IDA)

There are 5 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
10 O53579 (/HDA) O53579 (/HDA) O53579 (/HDA) O53579 (/HDA) O53579 (/HDA) P9WQE1 (/HDA) P9WQE1 (/HDA) P9WQE1 (/HDA) P9WQE1 (/HDA) P9WQE1 (/HDA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
10 O53579 (/HDA) O53579 (/HDA) O53579 (/HDA) O53579 (/HDA) O53579 (/HDA) P9WQE1 (/HDA) P9WQE1 (/HDA) P9WQE1 (/HDA) P9WQE1 (/HDA) P9WQE1 (/HDA)
Polyketide synthase complex GO:0034081
A protein complex that carries out enzymatic reactions involved in the biosynthesis of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones.
8 P9WQE1 (/IMP) P9WQE1 (/IMP) P9WQE1 (/IMP) P9WQE1 (/IMP) P9WQE1 (/IMP) Q7TXL6 (/IMP) Q7TXL6 (/IMP) Q7TXL6 (/IMP)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
5 O53579 (/HDA) O53579 (/HDA) O53579 (/HDA) O53579 (/HDA) O53579 (/HDA)
Polyketide synthase complex GO:0034081
A protein complex that carries out enzymatic reactions involved in the biosynthesis of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones.
5 O53579 (/IDA) O53579 (/IDA) O53579 (/IDA) O53579 (/IDA) O53579 (/IDA)
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