The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
LysM domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 9: Uncharacterized protein, isoform W

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 0 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.

There are 3 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Activation of innate immune response GO:0002218
Any process that initiates an innate immune response. Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. Examples of this process include activation of the hypersensitive response of Arabidopsis thaliana and activation of any NOD or TLR signaling pathway in vertebrate species.
12 A0A0B4K620 (/IMP) A0A0B4K6S8 (/IMP) A4V2F2 (/IMP) B7Z0T3 (/IMP) Q0KIB9 (/IMP) Q4ABH3 (/IMP) Q7K554 (/IMP) Q7KNC5 (/IMP) Q8IPN9 (/IMP) Q8MSQ5 (/IMP)
(2 more)
Defense response to Gram-negative bacterium GO:0050829
Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism.
12 A0A0B4K620 (/IMP) A0A0B4K6S8 (/IMP) A4V2F2 (/IMP) B7Z0T3 (/IMP) Q0KIB9 (/IMP) Q4ABH3 (/IMP) Q7K554 (/IMP) Q7KNC5 (/IMP) Q8IPN9 (/IMP) Q8MSQ5 (/IMP)
(2 more)
Positive regulation of stem cell proliferation GO:2000648
Any process that activates or increases the frequency, rate or extent of stem cell proliferation.
12 A0A0B4K620 (/IMP) A0A0B4K6S8 (/IMP) A4V2F2 (/IMP) B7Z0T3 (/IMP) Q0KIB9 (/IMP) Q4ABH3 (/IMP) Q7K554 (/IMP) Q7KNC5 (/IMP) Q8IPN9 (/IMP) Q8MSQ5 (/IMP)
(2 more)

There are 2 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
12 A0A0B4K620 (/IDA) A0A0B4K6S8 (/IDA) A4V2F2 (/IDA) B7Z0T3 (/IDA) Q0KIB9 (/IDA) Q4ABH3 (/IDA) Q7K554 (/IDA) Q7KNC5 (/IDA) Q8IPN9 (/IDA) Q8MSQ5 (/IDA)
(2 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
12 A0A0B4K620 (/IDA) A0A0B4K6S8 (/IDA) A4V2F2 (/IDA) B7Z0T3 (/IDA) Q0KIB9 (/IDA) Q4ABH3 (/IDA) Q7K554 (/IDA) Q7KNC5 (/IDA) Q8IPN9 (/IDA) Q8MSQ5 (/IDA)
(2 more)
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