The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Helix-loop-helix DNA-binding domain
".
FunFam 82: Transcription factor ILI6
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 2 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
11 |
Q0DUR2 (/IPI)
Q0DUR2 (/IPI)
Q0DUR2 (/IPI)
Q0DUR2 (/IPI)
Q0DUR2 (/IPI)
Q0DUR2 (/IPI)
Q0DUR2 (/IPI)
Q9CA64 (/IPI)
Q9CA64 (/IPI)
Q9FLE9 (/IPI)
(1 more) |
|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
4 | Q9CA64 (/ISS) Q9CA64 (/ISS) Q9FLE9 (/ISS) Q9FLE9 (/ISS) |
There are 8 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Regulation of seed growth GO:0080113
Any process that modulates the frequency, rate or extent of growth of the seed of an plant.
|
7 | Q0DUR2 (/IMP) Q0DUR2 (/IMP) Q0DUR2 (/IMP) Q0DUR2 (/IMP) Q0DUR2 (/IMP) Q0DUR2 (/IMP) Q0DUR2 (/IMP) |
|
Response to light stimulus GO:0009416
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.
|
4 | Q8GW32 (/IMP) Q8GW32 (/IMP) Q8GW32 (/IMP) Q8GW32 (/IMP) |
|
Photomorphogenesis GO:0009640
The control of plant growth, development, and differentiation by the duration and nature of light, independent of photosynthesis.
|
2 | Q9FLE9 (/IMP) Q9FLE9 (/IMP) |
|
Response to brassinosteroid GO:0009741
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brassinosteroid stimulus.
|
2 | Q9FLE9 (/IEP) Q9FLE9 (/IEP) |
|
Brassinosteroid mediated signaling pathway GO:0009742
A series of molecular signals mediated by the detection of brassinosteroid.
|
2 | Q9CA64 (/IGI) Q9CA64 (/IGI) |
|
Unidimensional cell growth GO:0009826
The process in which a cell irreversibly increases in size in one
|
2 | Q9FLE9 (/IMP) Q9FLE9 (/IMP) |
|
Embryonic root morphogenesis GO:0010086
The process in which the anatomical structures of the embryonic root are generated and organized.
|
2 | Q9CA64 (/IMP) Q9CA64 (/IMP) |
|
Regulation of timing of transition from vegetative to reproductive phase GO:0048510
The process controlling the point in time during development when a vegetative meristem will change its identity to become an inflorescence or floral meristem, and/or the rate at which the change occurs.
|
2 | Q9FLE9 (/IMP) Q9FLE9 (/IMP) |
There are 2 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
9 | Q0DUR2 (/IDA) Q0DUR2 (/IDA) Q0DUR2 (/IDA) Q0DUR2 (/IDA) Q0DUR2 (/IDA) Q0DUR2 (/IDA) Q0DUR2 (/IDA) Q9CA64 (/IDA) Q9CA64 (/IDA) |
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
2 | Q9CA64 (/IDA) Q9CA64 (/IDA) |
