The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Helix-loop-helix DNA-binding domain
".
FunFam 125: Transcription factor EGL1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 2 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
5 | Q9CAD0 (/ISS) Q9CAD0 (/ISS) Q9CAD0 (/ISS) Q9FN69 (/ISS) Q9FN69 (/ISS) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
5 | Q9CAD0 (/IPI) Q9CAD0 (/IPI) Q9CAD0 (/IPI) Q9FN69 (/IPI) Q9FN69 (/IPI) |
There are 7 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Jasmonic acid mediated signaling pathway GO:0009867
A series of molecular signals mediated by jasmonic acid.
|
5 | Q9CAD0 (/IMP) Q9CAD0 (/IMP) Q9CAD0 (/IMP) Q9FN69 (/IMP) Q9FN69 (/IMP) |
|
Epidermal cell fate specification GO:0009957
The process in which a cell becomes capable of differentiating autonomously into an epidermal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.
|
5 | Q9CAD0 (/IMP) Q9CAD0 (/IMP) Q9CAD0 (/IMP) Q9FN69 (/IMP) Q9FN69 (/IMP) |
|
Trichome differentiation GO:0010026
The process in which a relatively unspecialized epidermal cell acquires the specialized features of a trichome cell. An example of this process is found in Arabidopsis thaliana.
|
5 | Q9CAD0 (/IMP) Q9CAD0 (/IMP) Q9CAD0 (/IMP) Q9FN69 (/IMP) Q9FN69 (/IMP) |
|
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
3 | Q9CAD0 (/TAS) Q9CAD0 (/TAS) Q9CAD0 (/TAS) |
|
Cell fate specification GO:0001708
The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.
|
2 | Q9FN69 (/IMP) Q9FN69 (/IMP) |
|
Trichome branching GO:0010091
Any process involved in the formation of branches in plant hair cells. An example of this process is found in Arabidopsis thaliana.
|
2 | Q9FN69 (/IMP) Q9FN69 (/IMP) |
|
Positive regulation of anthocyanin biosynthetic process GO:0031542
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of anthocyanins.
|
2 | Q9FN69 (/IMP) Q9FN69 (/IMP) |
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
5 | Q9CAD0 (/IDA) Q9CAD0 (/IDA) Q9CAD0 (/IDA) Q9FN69 (/IDA) Q9FN69 (/IDA) |
