CATH Superfamily 3.30.160.20
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 7: Double-stranded RNA-binding protein Staufen homolo...
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 22 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
8 | O95793 (/IPI) P25159 (/IPI) P25159 (/IPI) Q68SB1 (/IPI) Q68SB1 (/IPI) Q9NUL3 (/IPI) Q9NUL3 (/IPI) Q9Z108 (/IPI) |
Double-stranded RNA binding GO:0003725
Interacting selectively and non-covalently with double-stranded RNA.
|
6 | Q66HP4 (/IDA) Q94239 (/IDA) Q9ESY8 (/IDA) Q9ET50 (/IDA) Q9NUL3 (/IDA) Q9NUL3 (/IDA) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
5 | A0A2R8Q731 (/IPI) A0A2R8QEG8 (/IPI) F1Q5V4 (/IPI) F1QTC1 (/IPI) Q6P114 (/IPI) |
Double-stranded RNA binding GO:0003725
Interacting selectively and non-covalently with double-stranded RNA.
|
5 | O95793 (/TAS) P25159 (/TAS) P25159 (/TAS) Q9NUL3 (/TAS) Q9NUL3 (/TAS) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
4 | P25159 (/IDA) P25159 (/IDA) Q3L1C9 (/IDA) Q3L1C9 (/IDA) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
3 | O95793 (/HDA) Q9NUL3 (/HDA) Q9NUL3 (/HDA) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
3 | P25159 (/IDA) P25159 (/IDA) Q9Z108 (/IDA) |
Double-stranded RNA binding GO:0003725
Interacting selectively and non-covalently with double-stranded RNA.
|
3 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) Q9Z108 (/ISO) |
Protein phosphatase 1 binding GO:0008157
Interacting selectively and non-covalently with the enzyme protein phosphatase 1.
|
3 | Q66HP4 (/IPI) Q9ESY8 (/IPI) Q9ET50 (/IPI) |
Double-stranded RNA binding GO:0003725
Interacting selectively and non-covalently with double-stranded RNA.
|
2 | P25159 (/ISS) P25159 (/ISS) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
2 | P25159 (/NAS) P25159 (/NAS) |
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
|
2 | P25159 (/IDA) P25159 (/IDA) |
Microtubule binding GO:0008017
Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
|
2 | P25159 (/NAS) P25159 (/NAS) |
Kinesin binding GO:0019894
Interacting selectively and non-covalently and stoichiometrically with kinesin, a member of a superfamily of microtubule-based motor proteins that perform force-generating tasks such as organelle transport and chromosome segregation.
|
2 | Q68SB1 (/IDA) Q68SB1 (/IDA) |
Kinesin binding GO:0019894
Interacting selectively and non-covalently and stoichiometrically with kinesin, a member of a superfamily of microtubule-based motor proteins that perform force-generating tasks such as organelle transport and chromosome segregation.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Hsp70 protein binding GO:0030544
Interacting selectively and non-covalently with Hsp70 proteins, any of a group of heat shock proteins around 70kDa in size.
|
2 | Q68SB1 (/IDA) Q68SB1 (/IDA) |
Hsp70 protein binding GO:0030544
Interacting selectively and non-covalently with Hsp70 proteins, any of a group of heat shock proteins around 70kDa in size.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Ribosome binding GO:0043022
Interacting selectively and non-covalently with any part of a ribosome.
|
2 | Q68SB1 (/IDA) Q68SB1 (/IDA) |
Ribosome binding GO:0043022
Interacting selectively and non-covalently with any part of a ribosome.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Mitogen-activated protein kinase binding GO:0051019
Interacting selectively and non-covalently with a mitogen-activated protein kinase.
|
2 | Q68SB1 (/IDA) Q68SB1 (/IDA) |
Mitogen-activated protein kinase binding GO:0051019
Interacting selectively and non-covalently with a mitogen-activated protein kinase.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Protein phosphatase 1 binding GO:0008157
Interacting selectively and non-covalently with the enzyme protein phosphatase 1.
|
1 | Q9Z108 (/ISO) |
There are 62 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Germ cell development GO:0007281
The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.
|
7 | A0A2R8Q731 (/IMP) A0A2R8QEG8 (/IMP) F1Q5V4 (/IMP) F1QTC1 (/IMP) Q6P114 (/IMP) Q7ZW47 (/IMP) Q7ZW47 (/IMP) |
Cellular response to oxidative stress GO:0034599
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
|
5 | Q66HP4 (/IEP) Q68SB1 (/IEP) Q68SB1 (/IEP) Q9ESY8 (/IEP) Q9ET50 (/IEP) |
Modulation of chemical synaptic transmission GO:0050804
Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission.
|
3 | Q66HP4 (/IDA) Q9ESY8 (/IDA) Q9ET50 (/IDA) |
Modulation of chemical synaptic transmission GO:0050804
Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission.
|
3 | Q66HP4 (/IMP) Q9ESY8 (/IMP) Q9ET50 (/IMP) |
Modification of postsynaptic structure GO:0099010
Any process that modifies the structure of a postsynapse.
|
3 | Q66HP4 (/IDA) Q9ESY8 (/IDA) Q9ET50 (/IDA) |
Modification of postsynaptic structure GO:0099010
Any process that modifies the structure of a postsynapse.
|
3 | Q66HP4 (/IMP) Q9ESY8 (/IMP) Q9ET50 (/IMP) |
Positive regulation of long-term synaptic potentiation GO:1900273
Any process that activates or increases the frequency, rate or extent of long-term synaptic potentiation.
|
3 | Q66HP4 (/IMP) Q9ESY8 (/IMP) Q9ET50 (/IMP) |
RNA localization GO:0006403
A process in which RNA is transported to, or maintained in, a specific location.
|
2 | P25159 (/IMP) P25159 (/IMP) |
Pole plasm assembly GO:0007315
Establishment of the specialized cytoplasm found at the poles of the egg. An example of this is found in Drosophila melanogaster.
|
2 | P25159 (/IMP) P25159 (/IMP) |
Pole plasm RNA localization GO:0007316
Any process in which RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.
|
2 | P25159 (/IMP) P25159 (/IMP) |
Regulation of pole plasm oskar mRNA localization GO:0007317
Any process that modulates the frequency, rate or extent of the process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.
|
2 | P25159 (/IGI) P25159 (/IGI) |
Regulation of pole plasm oskar mRNA localization GO:0007317
Any process that modulates the frequency, rate or extent of the process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Pole plasm protein localization GO:0007318
Any process in which a protein is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.
|
2 | P25159 (/IMP) P25159 (/IMP) |
Pole plasm protein localization GO:0007318
Any process in which a protein is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Neuroblast fate determination GO:0007400
The cell fate determination process in which a cell becomes capable of differentiating autonomously into a neuroblast cell regardless of its environment; upon determination, the cell fate cannot be reversed. An example of this process is found in Mus musculus.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Long-term memory GO:0007616
The memory process that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Protein localization GO:0008104
Any process in which a protein is transported to, or maintained in, a specific location.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Intracellular mRNA localization GO:0008298
Any process in which mRNA is transported to, or maintained in, a specific location within the cell.
|
2 | P25159 (/IMP) P25159 (/IMP) |
Intracellular mRNA localization GO:0008298
Any process in which mRNA is transported to, or maintained in, a specific location within the cell.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Germ cell migration GO:0008354
The orderly movement of a cell specialized to produce haploid gametes through the embryo from its site of production to the place where the gonads will form.
|
2 | Q7ZW47 (/IMP) Q7ZW47 (/IMP) |
Anterior/posterior axis specification, embryo GO:0008595
The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote.
|
2 | P25159 (/IGI) P25159 (/IGI) |
Regulation of gene expression GO:0010468
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
2 | Q68SB1 (/IMP) Q68SB1 (/IMP) |
Regulation of gene expression GO:0010468
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Positive regulation of cytoplasmic mRNA processing body assembly GO:0010606
Any process that increases the rate, frequency, or extent of the aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic mRNA processing body.
|
2 | P25159 (/IMP) P25159 (/IMP) |
Regulation of protein localization GO:0032880
Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location.
|
2 | Q3L1C9 (/IMP) Q3L1C9 (/IMP) |
Regulation of actin cytoskeleton organization GO:0032956
Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
|
2 | Q68SB1 (/IMP) Q68SB1 (/IMP) |
Regulation of actin cytoskeleton organization GO:0032956
Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Protein localization to synapse GO:0035418
Any process in which a protein is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.
|
2 | P25159 (/IMP) P25159 (/IMP) |
Asymmetric protein localization involved in cell fate determination GO:0045167
Any process in which a protein is transported to, or maintained in, a specific asymmetric distribution, resulting in the formation of daughter cells of different types.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Bicoid mRNA localization GO:0045450
Any process in which bicoid mRNA is transported to and maintained within the oocyte as part of the specification of the anterior/posterior axis.
|
2 | P25159 (/NAS) P25159 (/NAS) |
Bicoid mRNA localization GO:0045450
Any process in which bicoid mRNA is transported to and maintained within the oocyte as part of the specification of the anterior/posterior axis.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Pole plasm oskar mRNA localization GO:0045451
Any process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Positive regulation of synaptic growth at neuromuscular junction GO:0045887
Any process that activates or increases the frequency, rate or extent of synaptic growth at neuromuscular junction.
|
2 | P25159 (/IMP) P25159 (/IMP) |
Regulation of oskar mRNA translation GO:0046011
Any process that modulates the frequency, rate or extent of oskar mRNA translation. To ensure the localization of Oskar protein at the posterior pole of the oocyte, translation of oskar mRNA is repressed during its transport to the posterior pole and activated upon localization of the mRNA at the posterior cortex.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Positive regulation of oskar mRNA translation GO:0046012
Any process that activates or increases the frequency, rate or extent of oskar mRNA translation.
|
2 | P25159 (/NAS) P25159 (/NAS) |
Oogenesis GO:0048477
The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Eye morphogenesis GO:0048592
The process in which the anatomical structures of the eye are generated and organized.
|
2 | Q68SB1 (/IMP) Q68SB1 (/IMP) |
Eye morphogenesis GO:0048592
The process in which the anatomical structures of the eye are generated and organized.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Regulation of filopodium assembly GO:0051489
Any process that modulates the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.
|
2 | Q68SB1 (/IMP) Q68SB1 (/IMP) |
Regulation of filopodium assembly GO:0051489
Any process that modulates the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Positive regulation of synapse assembly GO:0051965
Any process that activates, maintains or increases the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse.
|
2 | Q68SB1 (/IMP) Q68SB1 (/IMP) |
Positive regulation of synapse assembly GO:0051965
Any process that activates, maintains or increases the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Asymmetric neuroblast division GO:0055059
The process resulting in the physical partitioning and separation of a neuroblast into two daughter cells with different developmental potentials.
|
2 | P25159 (/NAS) P25159 (/NAS) |
Positive regulation of dendritic spine morphogenesis GO:0061003
Any process that increases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.
|
2 | Q68SB1 (/IMP) Q68SB1 (/IMP) |
Positive regulation of dendritic spine morphogenesis GO:0061003
Any process that increases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Anterograde dendritic transport of messenger ribonucleoprotein complex GO:0098964
The directed movement of a messenger ribonucleoprotein complex along microtubules in nerve cell dendrites towards the postsynapse.
|
2 | Q68SB1 (/IMP) Q68SB1 (/IMP) |
Anterograde dendritic transport of messenger ribonucleoprotein complex GO:0098964
The directed movement of a messenger ribonucleoprotein complex along microtubules in nerve cell dendrites towards the postsynapse.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Positive regulation of long-term synaptic depression GO:1900454
Any process that activates or increases the frequency, rate or extent of long term synaptic depression.
|
2 | Q68SB1 (/IMP) Q68SB1 (/IMP) |
Positive regulation of long-term synaptic depression GO:1900454
Any process that activates or increases the frequency, rate or extent of long term synaptic depression.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Germ cell development GO:0007281
The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.
|
1 | Q94239 (/IGI) |
Intracellular mRNA localization GO:0008298
Any process in which mRNA is transported to, or maintained in, a specific location within the cell.
|
1 | Q9Z108 (/IDA) |
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
1 | Q94239 (/IMP) |
Positive regulation of viral genome replication GO:0045070
Any process that activates or increases the frequency, rate or extent of viral genome replication.
|
1 | O95793 (/IMP) |
Positive regulation of viral genome replication GO:0045070
Any process that activates or increases the frequency, rate or extent of viral genome replication.
|
1 | Q9Z108 (/ISO) |
Positive regulation by virus of viral protein levels in host cell GO:0046726
Any process where the infecting virus increases the levels of viral proteins in a cell.
|
1 | O95793 (/IMP) |
Positive regulation by virus of viral protein levels in host cell GO:0046726
Any process where the infecting virus increases the levels of viral proteins in a cell.
|
1 | Q9Z108 (/ISO) |
Modulation of chemical synaptic transmission GO:0050804
Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission.
|
1 | Q9Z108 (/ISO) |
Dendritic transport of messenger ribonucleoprotein complex GO:0098963
The directed movement of a messenger ribonucleoprotein complex along microtubules in nerve cell dendrites.
|
1 | Q9Z108 (/IDA) |
Dendritic transport of messenger ribonucleoprotein complex GO:0098963
The directed movement of a messenger ribonucleoprotein complex along microtubules in nerve cell dendrites.
|
1 | Q9Z108 (/IMP) |
Modification of postsynaptic structure GO:0099010
Any process that modifies the structure of a postsynapse.
|
1 | Q9Z108 (/ISO) |
Positive regulation of long-term synaptic potentiation GO:1900273
Any process that activates or increases the frequency, rate or extent of long-term synaptic potentiation.
|
1 | Q9Z108 (/ISO) |
Negative regulation of RNA interference GO:1900369
Any process that stops, prevents or reduces the frequency, rate or extent of RNA interference.
|
1 | Q94239 (/IMP) |
There are 52 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
|
9 | P25159 (/IDA) P25159 (/IDA) Q3L1C9 (/IDA) Q3L1C9 (/IDA) Q66HP4 (/IDA) Q68SB1 (/IDA) Q68SB1 (/IDA) Q9ESY8 (/IDA) Q9ET50 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
8 | O95793 (/IDA) P25159 (/IDA) P25159 (/IDA) Q66HP4 (/IDA) Q68SB1 (/IDA) Q68SB1 (/IDA) Q9ESY8 (/IDA) Q9ET50 (/IDA) |
Neuron projection GO:0043005
A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
|
5 | Q3L1C9 (/IDA) Q3L1C9 (/IDA) Q66HP4 (/IDA) Q9ESY8 (/IDA) Q9ET50 (/IDA) |
Messenger ribonucleoprotein complex GO:1990124
A ribonucleoprotein complex containing both protein and messenger RNA (mRNA) molecules.
|
4 | P25159 (/IDA) P25159 (/IDA) Q68SB1 (/IDA) Q68SB1 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
3 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) Q9Z108 (/ISO) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
3 | A0A087X1A5 (/IDA) O95793 (/IDA) Q5JW30 (/IDA) |
Cell cortex GO:0005938
The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
|
3 | P25159 (/IDA) P25159 (/IDA) Q6JPI2 (/IDA) |
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
|
3 | Q68SB1 (/IDA) Q68SB1 (/IDA) Q9Z108 (/IDA) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
3 | O95793 (/HDA) Q9NUL3 (/HDA) Q9NUL3 (/HDA) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
|
3 | O95793 (/IDA) Q68SB1 (/IDA) Q68SB1 (/IDA) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
|
3 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) Q9Z108 (/ISO) |
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
|
3 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) Q9Z108 (/ISO) |
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
|
3 | Q66HP4 (/IDA) Q9ESY8 (/IDA) Q9ET50 (/IDA) |
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
|
3 | Q66HP4 (/IMP) Q9ESY8 (/IMP) Q9ET50 (/IMP) |
P-body GO:0000932
A focus in the cytoplasm where mRNAs may become inactivated by decapping or some other mechanism. Protein and RNA localized to these foci are involved in mRNA degradation, nonsense-mediated mRNA decay (NMD), translational repression, and RNA-mediated gene silencing.
|
2 | P25159 (/IDA) P25159 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | Q68SB1 (/IDA) Q68SB1 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Basal plasma membrane GO:0009925
The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.
|
2 | P25159 (/IDA) P25159 (/IDA) |
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Apical plasma membrane GO:0016324
The region of the plasma membrane located at the apical end of the cell.
|
2 | P25159 (/IDA) P25159 (/IDA) |
Axon GO:0030424
The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
|
2 | Q68SB1 (/IDA) Q68SB1 (/IDA) |
Axon GO:0030424
The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Nuclear membrane GO:0031965
Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space.
|
2 | Q68SB1 (/IDA) Q68SB1 (/IDA) |
Nuclear membrane GO:0031965
Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Dendritic shaft GO:0043198
Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.
|
2 | Q68SB1 (/IDA) Q68SB1 (/IDA) |
Dendritic shaft GO:0043198
Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Apical part of cell GO:0045177
The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue.
|
2 | P25159 (/IDA) P25159 (/IDA) |
Apical cortex GO:0045179
The region that lies just beneath the plasma membrane on the apical edge of a cell.
|
2 | P25159 (/IDA) P25159 (/IDA) |
Basal cortex GO:0045180
The region that lies just beneath the plasma membrane on the basal edge of a cell.
|
2 | P25159 (/IDA) P25159 (/IDA) |
Basal cortex GO:0045180
The region that lies just beneath the plasma membrane on the basal edge of a cell.
|
2 | P25159 (/NAS) P25159 (/NAS) |
Basal cortex GO:0045180
The region that lies just beneath the plasma membrane on the basal edge of a cell.
|
2 | P25159 (/TAS) P25159 (/TAS) |
Germ plasm GO:0060293
Differentiated cytoplasm associated with a pole of an oocyte, egg or early embryo that will be inherited by the cells that will give rise to the germ line.
|
2 | P25159 (/IDA) P25159 (/IDA) |
Subsynaptic reticulum GO:0071212
An elaborate tubulolamellar membrane system that underlies the postsynaptic cell membrane.
|
2 | P25159 (/IDA) P25159 (/IDA) |
Neuronal ribonucleoprotein granule GO:0071598
A ribonucleoprotein complex that is found in the cytoplasm of axons and dendrites, and transports translationally silenced mRNAs to dendritic synapses, where they are released and translated in response to specific exogenous stimuli.
|
2 | P25159 (/IDA) P25159 (/IDA) |
Messenger ribonucleoprotein complex GO:1990124
A ribonucleoprotein complex containing both protein and messenger RNA (mRNA) molecules.
|
2 | Q8CJ67 (/ISO) Q8CJ67 (/ISO) |
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
|
1 | O95793 (/IDA) |
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
|
1 | Q9Z108 (/ISO) |
Rough endoplasmic reticulum GO:0005791
The rough (or granular) endoplasmic reticulum (ER) has ribosomes adhering to the outer surface; the ribosomes are the site of translation of the mRNA for those proteins which are either to be retained within the cisternae (ER-resident proteins), the proteins of the lysosomes, or the proteins destined for export from the cell. Glycoproteins undergo their initial glycosylation within the cisternae.
|
1 | O95793 (/TAS) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | Q9Z108 (/ISO) |
Microtubule associated complex GO:0005875
Any multimeric complex connected to a microtubule.
|
1 | O95793 (/TAS) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
1 | O95793 (/IDA) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
1 | Q9Z108 (/ISO) |
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
|
1 | O95793 (/ISS) |
Cytoplasmic ribonucleoprotein granule GO:0036464
A ribonucleoprotein granule located in the cytoplasm.
|
1 | O95793 (/IDA) |
Cytoplasmic ribonucleoprotein granule GO:0036464
A ribonucleoprotein granule located in the cytoplasm.
|
1 | Q9Z108 (/ISO) |
Neuron projection GO:0043005
A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
|
1 | Q9Z108 (/ISO) |
Cell body GO:0044297
The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.
|
1 | O95793 (/IDA) |
Cell body GO:0044297
The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.
|
1 | Q9Z108 (/ISO) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
|
1 | O95793 (/HDA) |
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
|
1 | Q9Z108 (/ISO) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
1 | Q9Z108 (/IDA) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
1 | Q6JPI2 (/IPI) |