PDB 5jvg

PDB Links
Overview

PDB Information

PDB	5JVG
Method	X-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation	Avilamycin and evernimicin induce structural changes in rProteins uL16 and CTC that enhance the inhibition of A-site tRNA binding. Krupkin, M., Wekselman, I., Matzov, D., Eyal, Z., Diskin Posner, Y., Rozenberg, H., Zimmerman, E., Bashan, A., Yonath, A. Proc.Natl.Acad.Sci.USA
Header	Ribosome
Released	2016-05-11
Resolution	3.430
CATH Insert Date	20 Nov, 2016

PDB Images (57)

5jvg

PDB 5jvg

5jvg1

PDB Chain 5jvg1

5jvg2

PDB Chain 5jvg2

5jvg3

PDB Chain 5jvg3

5jvgA

PDB Chain 5jvgA

5jvgB

PDB Chain 5jvgB

5jvgC

PDB Chain 5jvgC

5jvgD

PDB Chain 5jvgD

5jvgE

PDB Chain 5jvgE

5jvgF

PDB Chain 5jvgF

5jvgG

PDB Chain 5jvgG

5jvgH

PDB Chain 5jvgH

5jvgI

PDB Chain 5jvgI

5jvgJ

PDB Chain 5jvgJ

5jvgK

PDB Chain 5jvgK

5jvgL

PDB Chain 5jvgL

5jvgM

PDB Chain 5jvgM

5jvgN

PDB Chain 5jvgN

5jvgO

PDB Chain 5jvgO

5jvgP

PDB Chain 5jvgP

5jvgQ

PDB Chain 5jvgQ

5jvgR

PDB Chain 5jvgR

5jvgS

PDB Chain 5jvgS

5jvgT

PDB Chain 5jvgT

5jvgU

PDB Chain 5jvgU

5jvgV

PDB Chain 5jvgV

5jvgW

PDB Chain 5jvgW

5jvgX

PDB Chain 5jvgX

5jvgY

PDB Chain 5jvgY

5jvgZ

PDB Chain 5jvgZ

5jvg100

CATH Domain 5jvg100

5jvg200

CATH Domain 5jvg200

5jvg300

CATH Domain 5jvg300

5jvgB00

CATH Domain 5jvgB00

5jvgC00

CATH Domain 5jvgC00

5jvgD00

CATH Domain 5jvgD00

5jvgE01

CATH Domain 5jvgE01

5jvgE02

CATH Domain 5jvgE02

5jvgF00

CATH Domain 5jvgF00

5jvgG00

CATH Domain 5jvgG00

5jvgH00

CATH Domain 5jvgH00

5jvgI00

CATH Domain 5jvgI00

5jvgJ01

CATH Domain 5jvgJ01

5jvgK00

CATH Domain 5jvgK00

5jvgL01

CATH Domain 5jvgL01

5jvgM00

CATH Domain 5jvgM00

5jvgO00

CATH Domain 5jvgO00

5jvgP00

CATH Domain 5jvgP00

5jvgQ00

CATH Domain 5jvgQ00

5jvgR00

CATH Domain 5jvgR00

5jvgS01

CATH Domain 5jvgS01

5jvgS02

CATH Domain 5jvgS02

5jvgT01

CATH Domain 5jvgT01

5jvgU00

CATH Domain 5jvgU00

5jvgV00

CATH Domain 5jvgV00

5jvgW00

CATH Domain 5jvgW00

5jvgZ01

CATH Domain 5jvgZ01

PDB Prints

PDB Chains (29)

Chain ID	Date inserted into CATH	CATH Status
1	21 Nov, 2016	Chopped
2	21 Nov, 2016	Chopped
3	21 Nov, 2016	Chopped
A	21 Nov, 2016	Holding pen
B	21 Nov, 2016	Chopped
C	21 Nov, 2016	Chopped
D	21 Nov, 2016	Chopped
E	21 Nov, 2016	Chopped
F	21 Nov, 2016	Chopped
G	21 Nov, 2016	Chopped
H	21 Nov, 2016	Chopped
I	21 Nov, 2016	Chopped
J	21 Nov, 2016	Chopped
K	21 Nov, 2016	Chopped
L	21 Nov, 2016	Chopped
M	21 Nov, 2016	Chopped
N	21 Nov, 2016	Holding pen
O	21 Nov, 2016	Chopped
P	21 Nov, 2016	Chopped
Q	21 Nov, 2016	Chopped
R	21 Nov, 2016	Chopped
S	21 Nov, 2016	Chopped
T	21 Nov, 2016	Chopped
U	21 Nov, 2016	Chopped
V	21 Nov, 2016	Chopped
W	21 Nov, 2016	Chopped
X	21 Nov, 2016	Rejected
Y	21 Nov, 2016	Rejected
Z	21 Nov, 2016	Chopped

CATH Domains (27)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5jvg100	24 Nov, 2016	2.20.28.120	Assigned
5jvg200	24 Nov, 2016	1.10.287.3980	Assigned
5jvg300	24 Nov, 2016	4.10.410.60	Assigned
5jvgB00	24 Nov, 2016		Holding pen
5jvgC00	24 Nov, 2016		Holding pen
5jvgD00	24 Nov, 2016	3.30.1440.10	Assigned
5jvgE01	24 Nov, 2016	3.90.930.12	Assigned
5jvgE02	24 Nov, 2016	3.90.930.12	Assigned
5jvgF00	24 Nov, 2016	1.10.10.250	Assigned
5jvgG00	14 Dec, 2017		Holding pen
5jvgH00	24 Nov, 2016	2.40.150.20	Assigned
5jvgI00	24 Nov, 2016		Holding pen
5jvgJ01	24 Nov, 2016	3.90.1170.10	Assigned
5jvgK00	24 Nov, 2016	3.90.1030.10	Assigned
5jvgL01	24 Nov, 2016	3.30.420.100	Assigned
5jvgM00	24 Nov, 2016		Holding pen
5jvgO00	24 Nov, 2016		Holding pen
5jvgP00	24 Nov, 2016	3.90.470.10	Assigned
5jvgQ00	24 Nov, 2016	3.30.70.330	Assigned
5jvgR00	24 Nov, 2016		Holding pen
5jvgS01	24 Nov, 2016	2.40.240.10	Assigned
5jvgS02	24 Nov, 2016	2.170.120.20	Assigned
5jvgT01	24 Nov, 2016		Holding pen
5jvgU00	24 Nov, 2016		Holding pen
5jvgV00	24 Nov, 2016		Holding pen
5jvgW00	24 Nov, 2016	3.30.1390.20	Assigned
5jvgZ01	24 Nov, 2016		Holding pen

UniProtKB Entries (26)

Accession	Gene ID	Taxon	Description
Q9RXY1	RL13_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L13
Q9RSW6	RL35_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L35
Q9RRG8	RL28_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L28
Q9RXJ7	RL22_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L22
Q9RSL3	RL6_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L6
Q9RSW7	RL20_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L20
Q9RXJ5	RL16_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L16
Q9RSJ5	RL17_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L17
Q9RXK1	RL4_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L4
Q9RXJ1	RL24_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L24
Q9RX88	RL25_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L25
Q9RXJ0	RL5_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L5
Q9RY65	RL27_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L27
Q9RSK9	RL15_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L15
Q9RXK0	RL23_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L23
Q9RSS4	RL33_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L33
Q9RSL2	RL18_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L18
Q9RXJ2	RL14_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L14
Q9RSH2	RL34_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L34
Q9RXK2	RL3_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L3
Q9RXJ9	RL2_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L2
Q9RXJ4	RL29_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L29
Q9RWB4	RL19_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L19
Q9RSL0	RL30_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L30
Q9RSS7	RL11_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L11
P49228	RL32_DEIRA	Deinococcus radiodurans R1	50S ribosomal protein L32