The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
Ribosomal protein L6, alpha-beta domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: 50S ribosomal protein L6

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 5 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
184 P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA)
(174 more)
Large ribosomal subunit rRNA binding GO:0070180
Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
184 P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA)
(174 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
8 P46898 (/IPI) P46898 (/IPI) P46898 (/IPI) P46898 (/IPI) P46898 (/IPI) P46898 (/IPI) P46898 (/IPI) P46898 (/IPI)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
6 Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
2 O23049 (/IMP) O23049 (/IMP)

There are 5 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Ribosomal large subunit assembly GO:0000027
The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit.
184 P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA)
(174 more)
Ribosomal large subunit assembly GO:0000027
The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit.
184 P0AG55 (/IMP) P0AG55 (/IMP) P0AG55 (/IMP) P0AG55 (/IMP) P0AG55 (/IMP) P0AG55 (/IMP) P0AG55 (/IMP) P0AG55 (/IMP) P0AG55 (/IMP) P0AG55 (/IMP)
(174 more)
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
6 Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS)
Response to cytokinin GO:0009735
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
2 O23049 (/IDA) O23049 (/IDA)
Embryo development ending in seed dormancy GO:0009793
The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
2 O23049 (/IMP) O23049 (/IMP)

There are 9 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
184 P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA)
(174 more)
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
184 P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA) P0AG55 (/IDA)
(174 more)
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
13 P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA)
(3 more)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
13 P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA) P9WH81 (/HDA)
(3 more)
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
6 Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS) Q9KNZ9 (/ISS)
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
2 O23049 (/IDA) O23049 (/IDA)
Chloroplast stroma GO:0009570
The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.
2 O23049 (/IDA) O23049 (/IDA)
Chloroplast envelope GO:0009941
The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.
2 O23049 (/IDA) O23049 (/IDA)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
2 O23049 (/IDA) O23049 (/IDA)
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