The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: Single-stranded-DNA-specific exonuclease RecJ

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 4 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
13 P21893 (/IPI) P21893 (/IPI) P21893 (/IPI) P21893 (/IPI) P21893 (/IPI) P21893 (/IPI) P21893 (/IPI) P21893 (/IPI) P21893 (/IPI) P21893 (/IPI)
(3 more)
Single-stranded DNA 5'-3' exodeoxyribonuclease activity GO:0045145
Catalysis of the sequential cleavage of nucleotides (such as mononucleotides or dinucleotides) from a free 5' terminus of a single-stranded DNA molecule.
13 P21893 (/IDA) P21893 (/IDA) P21893 (/IDA) P21893 (/IDA) P21893 (/IDA) P21893 (/IDA) P21893 (/IDA) P21893 (/IDA) P21893 (/IDA) P21893 (/IDA)
(3 more)
Single-stranded DNA exodeoxyribonuclease activity GO:0008297
Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a single-stranded DNA molecule.
5 Q60B54 (/ISS) Q9KPF1 (/ISS) Q9KPF1 (/ISS) Q9KPF1 (/ISS) Q9KPF1 (/ISS)
5'-3' exonuclease activity GO:0008409
Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end.
1 D0EM60 (/IDA)

There are 4 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
DNA repair GO:0006281
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
13 P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP)
(3 more)
DNA recombination GO:0006310
Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
13 P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP)
(3 more)
Response to X-ray GO:0010165
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz).
13 P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP) P21893 (/IMP)
(3 more)
DNA recombination GO:0006310
Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
5 Q60B54 (/ISS) Q9KPF1 (/ISS) Q9KPF1 (/ISS) Q9KPF1 (/ISS) Q9KPF1 (/ISS)

There are 0 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
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