The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
".
FunFam 4: Proteasome subunit alpha type-4
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 3 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Endopeptidase activity GO:0004175
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
|
15 |
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
(5 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
15 |
P30186 (/IPI)
P30186 (/IPI)
P40303 (/IPI)
P40303 (/IPI)
P40303 (/IPI)
P40303 (/IPI)
P40303 (/IPI)
P40303 (/IPI)
P40303 (/IPI)
P40303 (/IPI)
(5 more) |
Endopeptidase activity GO:0004175
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
|
4 | P25156 (/IDA) Q60177 (/IDA) Q9V2V6 (/IDA) Q9V2V6 (/IDA) |
There are 11 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
15 |
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
(5 more) |
Proteasomal ubiquitin-independent protein catabolic process GO:0010499
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome but do not involve ubiquitin.
|
10 | P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) |
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
|
10 | P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) |
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
5 | Q9NDA2 (/ISM) Q9NDA2 (/ISM) Q9NDA2 (/ISM) Q9NDA2 (/ISM) Q9NDA2 (/ISM) |
Proteasomal protein catabolic process GO:0010498
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome.
|
4 | P25156 (/IDA) Q60177 (/IDA) Q9V2V6 (/IDA) Q9V2V6 (/IDA) |
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
|
4 | Q24178 (/ISS) Q24178 (/ISS) Q27575 (/ISS) Q27575 (/ISS) |
Proteolysis GO:0006508
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
|
1 | P34120 (/IDA) |
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
1 | O24616 (/TAS) |
Establishment of cell polarity GO:0030010
The specification and formation of anisotropic intracellular organization or cell growth patterns.
|
1 | C8V668 (/IGI) |
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
|
1 | Q10329 (/IC) |
Positive regulation of mitotic metaphase/anaphase transition GO:0045842
Any process that activates or increases the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.
|
1 | Q10329 (/IC) |
There are 29 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Proteasome core complex, alpha-subunit complex GO:0019773
The proteasome core subcomplex that constitutes the two outer rings of the proteasome core complex. An example of this component is found in Mus musculus.
|
183 |
A2YXU2 (/ISS)
A2YXU2 (/ISS)
A2YXU2 (/ISS)
A2YXU2 (/ISS)
A2YXU2 (/ISS)
A2Z3I9 (/ISS)
A2Z3I9 (/ISS)
A2Z3I9 (/ISS)
A2Z3I9 (/ISS)
A2Z3I9 (/ISS)
(173 more) |
Proteasome core complex GO:0005839
A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
|
15 |
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
Q8IDG2 (/ISS)
(5 more) |
Proteasome core complex, alpha-subunit complex GO:0019773
The proteasome core subcomplex that constitutes the two outer rings of the proteasome core complex. An example of this component is found in Mus musculus.
|
15 |
P25156 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
(5 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
14 |
P30186 (/IDA)
P30186 (/IDA)
P34120 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
P40303 (/IDA)
(4 more) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
10 | P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) |
Proteasome storage granule GO:0034515
A multisubunit proteasome complex that localizes in the cytoplasm as dot-like structures when cells are in a quiescent state.
|
10 | P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) |
Nuclear outer membrane-endoplasmic reticulum membrane network GO:0042175
The continuous network of membranes encompassing the nuclear outer membrane and the endoplasmic reticulum membrane.
|
10 | P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) P40303 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
7 | P34120 (/IDA) Q10329 (/IDA) Q9NDA2 (/IDA) Q9NDA2 (/IDA) Q9NDA2 (/IDA) Q9NDA2 (/IDA) Q9NDA2 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
5 | Q9NDA2 (/ISA) Q9NDA2 (/ISA) Q9NDA2 (/ISA) Q9NDA2 (/ISA) Q9NDA2 (/ISA) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
5 | Q9NDA2 (/IDA) Q9NDA2 (/IDA) Q9NDA2 (/IDA) Q9NDA2 (/IDA) Q9NDA2 (/IDA) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
5 | Q9NDA2 (/IDA) Q9NDA2 (/IDA) Q9NDA2 (/IDA) Q9NDA2 (/IDA) Q9NDA2 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
5 | Q9NDA2 (/ISA) Q9NDA2 (/ISA) Q9NDA2 (/ISA) Q9NDA2 (/ISA) Q9NDA2 (/ISA) |
Proteasome core complex GO:0005839
A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
|
5 | Q9NDA2 (/ISM) Q9NDA2 (/ISM) Q9NDA2 (/ISM) Q9NDA2 (/ISM) Q9NDA2 (/ISM) |
Proteasome complex GO:0000502
A large multisubunit complex which catalyzes protein degradation, found in eukaryotes, archaea and some bacteria. In eukaryotes, this complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core.
|
3 | O24616 (/IDA) P30186 (/IDA) P30186 (/IDA) |
Vacuole GO:0005773
A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol.
|
3 | O24616 (/IDA) P30186 (/IDA) P30186 (/IDA) |
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
|
3 | O24616 (/IDA) P30186 (/IDA) P30186 (/IDA) |
Vacuolar membrane GO:0005774
The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.
|
2 | P30186 (/IDA) P30186 (/IDA) |
Spindle GO:0005819
The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
|
2 | P30186 (/IDA) P30186 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
2 | P30186 (/IDA) P30186 (/IDA) |
Phragmoplast GO:0009524
Fibrous structure (light microscope view) that arises between the daughter nuclei at telophase and within which the initial partition (cell plate), dividing the mother cell in two (cytokinesis), is formed. Appears at first as a spindle connected to the two nuclei, but later spreads laterally in the form of a ring. Consists of microtubules.
|
2 | P30186 (/IDA) P30186 (/IDA) |
Cytosolic ribosome GO:0022626
A ribosome located in the cytosol.
|
2 | P30186 (/IDA) P30186 (/IDA) |
Extracellular region GO:0005576
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
|
1 | C8V668 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q10329 (/HDA) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
1 | Q4QH56 (/ISO) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
1 | Q4QH56 (/ISO) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
1 | Q4QH56 (/ISO) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | Q10329 (/HDA) |
Proteasome core complex, alpha-subunit complex GO:0019773
The proteasome core subcomplex that constitutes the two outer rings of the proteasome core complex. An example of this component is found in Mus musculus.
|
1 | C8V668 (/ISA) |
Nuclear periphery GO:0034399
The portion of the nuclear lumen proximal to the inner nuclear membrane.
|
1 | Q10329 (/IDA) |