The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"P-loop containing nucleotide triphosphate hydrolases
".
FunFam 108: ATP-dependent RNA helicase RhlE
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 16 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
RNA helicase activity GO:0003724
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of an RNA helix.
|
164 |
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
(154 more) |
RNA helicase activity GO:0003724
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of an RNA helix.
|
137 |
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
(127 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
131 |
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
(121 more) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
131 |
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
(121 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
87 |
P0A9P6 (/IPI)
P0A9P6 (/IPI)
P0A9P6 (/IPI)
P0A9P6 (/IPI)
P0A9P6 (/IPI)
P0A9P6 (/IPI)
P0A9P6 (/IPI)
P0A9P6 (/IPI)
P0A9P6 (/IPI)
P0A9P6 (/IPI)
(77 more) |
RNA strand annealing activity GO:0033592
Facilitates the base-pairing of complementary single-stranded RNA.
|
81 |
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
(71 more) |
Helicase activity GO:0004386
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.
|
36 |
Q3ZA18 (/ISS)
Q48DS1 (/ISS)
Q48DS1 (/ISS)
Q48DS1 (/ISS)
Q48DS1 (/ISS)
Q48DS1 (/ISS)
Q48DS1 (/ISS)
Q48DS1 (/ISS)
Q48DS1 (/ISS)
Q48DS1 (/ISS)
(26 more) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
33 |
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
(23 more) |
3'-5' RNA helicase activity GO:0034458
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of an RNA helix in the direction 3' to 5'.
|
27 |
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
(17 more) |
ATPase activity GO:0016887
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
|
25 |
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
P21693 (/IDA)
(15 more) |
Showing 1 to 10 of 16 entries
There are 15 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Ribosomal large subunit assembly GO:0000027
The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit.
|
104 |
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
(94 more) |
RNA catabolic process GO:0006401
The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
|
79 |
P0A9P6 (/IGI)
P0A9P6 (/IGI)
P0A9P6 (/IGI)
P0A9P6 (/IGI)
P0A9P6 (/IGI)
P0A9P6 (/IGI)
P0A9P6 (/IGI)
P0A9P6 (/IGI)
P0A9P6 (/IGI)
P0A9P6 (/IGI)
(69 more) |
Response to radiation GO:0009314
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
|
79 |
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
(69 more) |
Positive regulation of translation GO:0045727
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
|
79 |
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
(69 more) |
MRNA stabilization GO:0048255
Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules.
|
79 |
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
(69 more) |
Cellular response to cold GO:0070417
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
|
79 |
P0A9P6 (/IEP)
P0A9P6 (/IEP)
P0A9P6 (/IEP)
P0A9P6 (/IEP)
P0A9P6 (/IEP)
P0A9P6 (/IEP)
P0A9P6 (/IEP)
P0A9P6 (/IEP)
P0A9P6 (/IEP)
P0A9P6 (/IEP)
(69 more) |
Cellular response to cold GO:0070417
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
|
79 |
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
P0A9P6 (/IMP)
(69 more) |
Response to heat GO:0009408
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
|
52 |
P25888 (/IMP)
P25888 (/IMP)
P25888 (/IMP)
P25888 (/IMP)
P25888 (/IMP)
P25888 (/IMP)
P25888 (/IMP)
P25888 (/IMP)
P25888 (/IMP)
P25888 (/IMP)
(42 more) |
Ribosome assembly GO:0042255
The aggregation, arrangement and bonding together of the mature ribosome and of its subunits.
|
52 |
P25888 (/IGI)
P25888 (/IGI)
P25888 (/IGI)
P25888 (/IGI)
P25888 (/IGI)
P25888 (/IGI)
P25888 (/IGI)
P25888 (/IGI)
P25888 (/IGI)
P25888 (/IGI)
(42 more) |
Response to cold GO:0009409
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
|
8 | P96614 (/IGI) P96614 (/IGI) P96614 (/IGI) P96614 (/IGI) P96614 (/IGI) P96614 (/IGI) P96614 (/IGI) P96614 (/IGI) |
Showing 1 to 10 of 15 entries
There are 5 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
131 |
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
P0A9P6 (/IDA)
(121 more) |
Bacterial nucleoid GO:0043590
The region of a bacterial cell to which the DNA is confined.
|
131 |
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
A0R8U6 (/ISS)
(121 more) |
Bacterial nucleoid GO:0043590
The region of a bacterial cell to which the DNA is confined.
|
8 | P96614 (/IDA) P96614 (/IDA) P96614 (/IDA) P96614 (/IDA) P96614 (/IDA) P96614 (/IDA) P96614 (/IDA) P96614 (/IDA) |
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
5 | P9WH05 (/HDA) P9WH05 (/HDA) P9WH05 (/HDA) P9WH05 (/HDA) P9WH05 (/HDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
5 | P9WH05 (/HDA) P9WH05 (/HDA) P9WH05 (/HDA) P9WH05 (/HDA) P9WH05 (/HDA) |
Showing 1 to 5 of 5 entries