The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
TPP-binding domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 5: NAD-dependent deacetylase sirtuin-2

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 48 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Histone deacetylase activity GO:0004407
Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction represents the removal of an acetyl group from a histone, a class of proteins complexed to DNA in chromatin and chromosomes.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
NAD-dependent protein deacetylase activity GO:0034979
Catalysis of the removal of one or more acetyl groups from a protein, requiring NAD.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
NAD-dependent histone deacetylase activity (H4-K16 specific) GO:0046970
Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
6 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8VDQ8 (/ISS)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
6 Q8IXJ6 (/IPI) Q8IXJ6 (/IPI) Q8IXJ6 (/IPI) Q8R104 (/IPI) Q8VDQ8 (/IPI) Q9NTG7 (/IPI)
Tubulin deacetylase activity GO:0042903
Catalysis of the reaction: N-acetyl(alpha-tubulin) + H2O = alpha-tubulin + acetate.
6 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
NAD-dependent histone deacetylase activity GO:0017136
Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from a histone.
5 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q9I7I7 (/IDA) Q9I7I7 (/IDA)
Protein deacetylase activity GO:0033558
Catalysis of the hydrolysis of an acetyl group or groups from a protein substrate.
5 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8VDQ8 (/IMP) Q9USN7 (/IMP)
Protein deacetylase activity GO:0033558
Catalysis of the hydrolysis of an acetyl group or groups from a protein substrate.
5 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS)
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
4 Q8IXJ6 (/IPI) Q8IXJ6 (/IPI) Q8IXJ6 (/IPI) Q8VDQ8 (/IPI)
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
4 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q9NTG7 (/IDA)
Protein deacetylase activity GO:0033558
Catalysis of the hydrolysis of an acetyl group or groups from a protein substrate.
4 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8VDQ8 (/IDA)
NAD-dependent protein deacetylase activity GO:0034979
Catalysis of the removal of one or more acetyl groups from a protein, requiring NAD.
4 Q5RJQ4 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Tubulin deacetylase activity GO:0042903
Catalysis of the reaction: N-acetyl(alpha-tubulin) + H2O = alpha-tubulin + acetate.
4 Q5RJQ4 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Histone deacetylase activity GO:0004407
Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction represents the removal of an acetyl group from a histone, a class of proteins complexed to DNA in chromatin and chromosomes.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Histone deacetylase activity GO:0004407
Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction represents the removal of an acetyl group from a histone, a class of proteins complexed to DNA in chromatin and chromosomes.
3 Q8VDQ8 (/IMP) Q9I7I7 (/IMP) Q9I7I7 (/IMP)
NAD-dependent protein deacetylase activity GO:0034979
Catalysis of the removal of one or more acetyl groups from a protein, requiring NAD.
3 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP)
Histone acetyltransferase binding GO:0035035
Interacting selectively and non-covalently with the enzyme histone acetyltransferase.
3 Q8IXJ6 (/IPI) Q8IXJ6 (/IPI) Q8IXJ6 (/IPI)
Histone deacetylase binding GO:0042826
Interacting selectively and non-covalently with the enzyme histone deacetylase.
3 Q8IXJ6 (/IPI) Q8IXJ6 (/IPI) Q8IXJ6 (/IPI)
Ubiquitin binding GO:0043130
Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
NAD-dependent histone deacetylase activity (H4-K16 specific) GO:0046970
Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
NAD+ binding GO:0070403
Interacting selectively and non-covalently with the oxidized form, NAD, of nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
2 Q8R104 (/ISO) Q8VDQ8 (/ISO)
NAD-dependent histone deacetylase activity GO:0017136
Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from a histone.
2 Q8VDQ8 (/ISO) Q9USN7 (/ISO)
Enzyme binding GO:0019899
Interacting selectively and non-covalently with any enzyme.
2 B2RZ31 (/IPI) C6ZII9 (/IPI)
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
2 Q8R104 (/IDA) Q9NTG7 (/IDA)
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
1 Q8VDQ8 (/ISO)
NAD+ ADP-ribosyltransferase activity GO:0003950
Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.
1 Q9NTG7 (/TAS)
Histone deacetylase activity GO:0004407
Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction represents the removal of an acetyl group from a histone, a class of proteins complexed to DNA in chromatin and chromosomes.
1 Q8VDQ8 (/ISO)
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
1 Q8VDQ8 (/ISO)
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
1 Q8VDQ8 (/ISS)
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
1 Q8R104 (/ISS)
NAD-dependent histone deacetylase activity GO:0017136
Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from a histone.
1 Q8VDQ8 (/ISS)
Enzyme binding GO:0019899
Interacting selectively and non-covalently with any enzyme.
1 Q8R104 (/ISO)
Protein deacetylase activity GO:0033558
Catalysis of the hydrolysis of an acetyl group or groups from a protein substrate.
1 Q8VDQ8 (/ISO)
NAD-dependent protein deacetylase activity GO:0034979
Catalysis of the removal of one or more acetyl groups from a protein, requiring NAD.
1 Q8VDQ8 (/ISO)
Histone acetyltransferase binding GO:0035035
Interacting selectively and non-covalently with the enzyme histone acetyltransferase.
1 Q8VDQ8 (/ISO)
Histone acetyltransferase binding GO:0035035
Interacting selectively and non-covalently with the enzyme histone acetyltransferase.
1 Q8VDQ8 (/ISS)
Histone deacetylase binding GO:0042826
Interacting selectively and non-covalently with the enzyme histone deacetylase.
1 Q8VDQ8 (/ISO)
Histone deacetylase binding GO:0042826
Interacting selectively and non-covalently with the enzyme histone deacetylase.
1 Q8VDQ8 (/ISS)
Tubulin deacetylase activity GO:0042903
Catalysis of the reaction: N-acetyl(alpha-tubulin) + H2O = alpha-tubulin + acetate.
1 Q8VDQ8 (/IMP)
Tubulin deacetylase activity GO:0042903
Catalysis of the reaction: N-acetyl(alpha-tubulin) + H2O = alpha-tubulin + acetate.
1 Q8VDQ8 (/ISO)
Ubiquitin binding GO:0043130
Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation.
1 Q8VDQ8 (/ISO)
Ubiquitin binding GO:0043130
Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation.
1 Q8VDQ8 (/ISS)
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
1 Q8R104 (/ISO)
NAD-dependent histone deacetylase activity (H4-K16 specific) GO:0046970
Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.
1 Q8VDQ8 (/ISO)
NAD+ binding GO:0070403
Interacting selectively and non-covalently with the oxidized form, NAD, of nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions.
1 Q8VDQ8 (/ISO)

There are 157 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436
Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Cellular response to oxidative stress GO:0034599
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Positive regulation of DNA binding GO:0043388
Any process that increases the frequency, rate or extent of DNA binding. DNA binding is any process in which a gene product interacts selectively with DNA (deoxyribonucleic acid).
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Cellular response to caloric restriction GO:0061433
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of caloric restriction, insufficient food energy intake.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Negative regulation of oligodendrocyte progenitor proliferation GO:0070446
Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8VDQ8 (/ISS)
Positive regulation of execution phase of apoptosis GO:1900119
Any process that activates or increases the frequency, rate or extent of execution phase of apoptosis.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Negative regulation of reactive oxygen species metabolic process GO:2000378
Any process that stops, prevents or reduces the frequency, rate or extent of reactive oxygen species metabolic process.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Negative regulation of peptidyl-threonine phosphorylation GO:0010801
Any process that decreases the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.
8 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Cellular lipid catabolic process GO:0044242
The chemical reactions and pathways resulting in the breakdown of lipids, as carried out by individual cells.
8 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Negative regulation of fat cell differentiation GO:0045599
Any process that stops, prevents, or reduces the frequency, rate or extent of adipocyte differentiation.
8 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Positive regulation of meiotic nuclear division GO:0045836
Any process that activates or increases the frequency, rate or extent of meiosis.
8 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Positive regulation of cell division GO:0051781
Any process that activates or increases the frequency, rate or extent of cell division.
8 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Positive regulation of attachment of spindle microtubules to kinetochore GO:0051987
Any process that activates or increases the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.
8 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Cellular response to epinephrine stimulus GO:0071872
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epinephrine stimulus. Epinephrine is a catecholamine that has the formula C9H13NO3; it is secreted by the adrenal medulla to act as a hormone, and released by certain neurons to act as a neurotransmitter active in the central nervous system.
8 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Tubulin deacetylation GO:0090042
The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic
8 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Positive regulation of oocyte maturation GO:1900195
Any process that activates or increases the frequency, rate or extent of oocyte maturation.
8 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Protein deacetylation GO:0006476
The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic
7 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8VDQ8 (/IDA) Q9I7I7 (/IDA) Q9I7I7 (/IDA) Q9NTG7 (/IDA)
Protein deacetylation GO:0006476
The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8R104 (/ISS)
Negative regulation of cell population proliferation GO:0008285
Any process that stops, prevents or reduces the rate or extent of cell proliferation.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Negative regulation of autophagy GO:0010507
Any process that stops, prevents, or reduces the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Myelination in peripheral nervous system GO:0022011
The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Regulation of myelination GO:0031641
Any process that modulates the frequency, rate or extent of the formation of a myelin sheath around nerve axons.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Peptidyl-lysine deacetylation GO:0034983
The removal of an acetyl group from an acetylated lysine residue in a peptide or protein.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8R104 (/ISS) Q8VDQ8 (/ISS)
Negative regulation of protein catabolic process GO:0042177
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Regulation of cell cycle GO:0051726
Any process that modulates the rate or extent of progression through the cell cycle.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Negative regulation of transcription from RNA polymerase II promoter in response to hypoxia GO:0061428
Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Histone H4 deacetylation GO:0070933
The modification of histone H4 by the removal of one or more acetyl groups.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Cellular response to hypoxia GO:0071456
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia GO:2000777
Any positive regulation of proteasomal ubiquitin-dependent protein catabolic process that is involved in a cellular response to hypoxia.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Protein deacetylation GO:0006476
The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic
6 Q5RJQ4 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8R104 (/IMP) Q8VDQ8 (/IMP)
Phosphatidylinositol 3-kinase signaling GO:0014065
A series of reactions within the signal-receiving cell, mediated by the intracellular phosphatidylinositol 3-kinase (PI3K). Many cell surface receptor linked signaling pathways signal through PI3K to regulate numerous cellular functions.
6 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8VDQ8 (/ISS)
Cellular response to hepatocyte growth factor stimulus GO:0035729
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.
6 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8VDQ8 (/ISS)
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
6 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8VDQ8 (/ISS)
Protein kinase B signaling GO:0043491
A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B (also called AKT), which occurs as a result of a single trigger reaction or compound.
6 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8VDQ8 (/ISS)
Hepatocyte growth factor receptor signaling pathway GO:0048012
The series of molecular signals generated as a consequence of the hepatocyte growth factor receptor binding to one of its physiological ligands.
6 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8VDQ8 (/ISS)
Cellular response to molecule of bacterial origin GO:0071219
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.
6 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q8VDQ8 (/ISS)
Histone H3 deacetylation GO:0070932
The modification of histone H3 by the removal of one or more acetyl groups.
5 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS)
Negative regulation of defense response to bacterium GO:1900425
Any process that stops, prevents or reduces the frequency, rate or extent of defense response to bacterium.
5 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS)
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
4 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8VDQ8 (/IMP)
Negative regulation of cell population proliferation GO:0008285
Any process that stops, prevents or reduces the rate or extent of cell proliferation.
4 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8VDQ8 (/IMP)
Histone H3 deacetylation GO:0070932
The modification of histone H3 by the removal of one or more acetyl groups.
4 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8VDQ8 (/IMP)
Tubulin deacetylation GO:0090042
The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic
4 Q5RJQ4 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Tubulin deacetylation GO:0090042
The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic
4 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8VDQ8 (/IMP)
Negative regulation of defense response to bacterium GO:1900425
Any process that stops, prevents or reduces the frequency, rate or extent of defense response to bacterium.
4 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8VDQ8 (/IMP)
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Chromatin silencing at rDNA GO:0000183
Repression of transcription of ribosomal DNA by altering the structure of chromatin.
3 Q8IXJ6 (/NAS) Q8IXJ6 (/NAS) Q8IXJ6 (/NAS)
Chromatin silencing GO:0006342
Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin.
3 Q8IXJ6 (/NAS) Q8IXJ6 (/NAS) Q8IXJ6 (/NAS)
Chromatin silencing at telomere GO:0006348
Repression of transcription of telomeric DNA by altering the structure of chromatin.
3 Q8IXJ6 (/NAS) Q8IXJ6 (/NAS) Q8IXJ6 (/NAS)
Protein ADP-ribosylation GO:0006471
The transfer, from NAD, of ADP-ribose to protein amino acids.
3 Q8IXJ6 (/NAS) Q8IXJ6 (/NAS) Q8IXJ6 (/NAS)
Regulation of exit from mitosis GO:0007096
Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity.
3 Q8IXJ6 (/NAS) Q8IXJ6 (/NAS) Q8IXJ6 (/NAS)
Negative regulation of autophagy GO:0010507
Any process that stops, prevents, or reduces the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.
3 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP)
Phosphatidylinositol 3-kinase signaling GO:0014065
A series of reactions within the signal-receiving cell, mediated by the intracellular phosphatidylinositol 3-kinase (PI3K). Many cell surface receptor linked signaling pathways signal through PI3K to regulate numerous cellular functions.
3 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP)
Gene silencing GO:0016458
Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.
3 Q8IXJ6 (/NAS) Q8IXJ6 (/NAS) Q8IXJ6 (/NAS)
Histone deacetylation GO:0016575
The modification of histones by removal of acetyl groups.
3 Q8IXJ6 (/TAS) Q8IXJ6 (/TAS) Q8IXJ6 (/TAS)
Substantia nigra development GO:0021762
The progression of the substantia nigra over time from its initial formation until its mature state. The substantia nigra is the layer of gray substance that separates the posterior parts of the cerebral peduncles (tegmentum mesencephali) from the anterior parts; it normally includes a posterior compact part with many pigmented cells (pars compacta) and an anterior reticular part whose cells contain little pigment (pars reticularis).
3 Q8IXJ6 (/HEP) Q8IXJ6 (/HEP) Q8IXJ6 (/HEP)
Peptidyl-lysine deacetylation GO:0034983
The removal of an acetyl group from an acetylated lysine residue in a peptide or protein.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Cellular response to hepatocyte growth factor stimulus GO:0035729
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Negative regulation of protein catabolic process GO:0042177
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
3 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP)
Regulation of phosphorylation GO:0042325
Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule.
3 Q8IXJ6 (/NAS) Q8IXJ6 (/NAS) Q8IXJ6 (/NAS)
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
3 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP)
Protein kinase B signaling GO:0043491
A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B (also called AKT), which occurs as a result of a single trigger reaction or compound.
3 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP)
Negative regulation of striated muscle tissue development GO:0045843
Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle development.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Hepatocyte growth factor receptor signaling pathway GO:0048012
The series of molecular signals generated as a consequence of the hepatocyte growth factor receptor binding to one of its physiological ligands.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Regulation of cell cycle GO:0051726
Any process that modulates the rate or extent of progression through the cell cycle.
3 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP)
Response to redox state GO:0051775
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating redox state. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.
3 Q8IXJ6 (/NAS) Q8IXJ6 (/NAS) Q8IXJ6 (/NAS)
Negative regulation of transcription from RNA polymerase II promoter in response to hypoxia GO:0061428
Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus.
3 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP)
Histone H4 deacetylation GO:0070933
The modification of histone H4 by the removal of one or more acetyl groups.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Cellular response to molecule of bacterial origin GO:0071219
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Cellular response to hypoxia GO:0071456
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Negative regulation of reactive oxygen species metabolic process GO:2000378
Any process that stops, prevents or reduces the frequency, rate or extent of reactive oxygen species metabolic process.
3 B2RZ31 (/IMP) C6ZII9 (/IMP) Q8VDQ8 (/IMP)
Positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia GO:2000777
Any positive regulation of proteasomal ubiquitin-dependent protein catabolic process that is involved in a cellular response to hypoxia.
3 Q8IXJ6 (/IMP) Q8IXJ6 (/IMP) Q8IXJ6 (/IMP)
Protein deacetylation GO:0006476
The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic
2 Q8R104 (/ISO) Q8VDQ8 (/ISO)
Aging GO:0007568
A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700).
2 B2RZ31 (/IEP) C6ZII9 (/IEP)
Determination of adult lifespan GO:0008340
The control of viability and duration in the adult phase of the life-cycle.
2 Q9I7I7 (/IMP) Q9I7I7 (/IMP)
Histone deacetylation GO:0016575
The modification of histones by removal of acetyl groups.
2 Q9I7I7 (/IMP) Q9I7I7 (/IMP)
Myelination in peripheral nervous system GO:0022011
The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.
2 Q5RJQ4 (/IMP) Q8VDQ8 (/IMP)
Regulation of myelination GO:0031641
Any process that modulates the frequency, rate or extent of the formation of a myelin sheath around nerve axons.
2 Q5RJQ4 (/IMP) Q8VDQ8 (/IMP)
Positive regulation of insulin secretion GO:0032024
Any process that activates or increases the frequency, rate or extent of the regulated release of insulin.
2 B2RZ31 (/IMP) C6ZII9 (/IMP)
Peptidyl-lysine deacetylation GO:0034983
The removal of an acetyl group from an acetylated lysine residue in a peptide or protein.
2 Q8R104 (/ISO) Q8VDQ8 (/ISO)
Negative regulation of ERK1 and ERK2 cascade GO:0070373
Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.
2 B2RZ31 (/IMP) C6ZII9 (/IMP)
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
1 Q8VDQ8 (/ISO)
Chromatin silencing at rDNA GO:0000183
Repression of transcription of ribosomal DNA by altering the structure of chromatin.
1 Q9USN7 (/IMP)
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
1 Q9USN7 (/ISO)
Protein ADP-ribosylation GO:0006471
The transfer, from NAD, of ADP-ribose to protein amino acids.
1 Q9NTG7 (/TAS)
Mitochondrion organization GO:0007005
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components.
1 Q9NTG7 (/TAS)
Central nervous system development GO:0007417
The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
1 Q5RJQ4 (/IEP)
Negative regulation of cell population proliferation GO:0008285
Any process that stops, prevents or reduces the rate or extent of cell proliferation.
1 Q8VDQ8 (/ISO)
Aerobic respiration GO:0009060
The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.
1 Q9NTG7 (/IMP)
Aerobic respiration GO:0009060
The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.
1 Q8R104 (/ISO)
Aerobic respiration GO:0009060
The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.
1 Q8R104 (/ISS)
Negative regulation of autophagy GO:0010507
Any process that stops, prevents, or reduces the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.
1 Q8VDQ8 (/ISO)
Negative regulation of peptidyl-threonine phosphorylation GO:0010801
Any process that decreases the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.
1 Q8VDQ8 (/IMP)
Phosphatidylinositol 3-kinase signaling GO:0014065
A series of reactions within the signal-receiving cell, mediated by the intracellular phosphatidylinositol 3-kinase (PI3K). Many cell surface receptor linked signaling pathways signal through PI3K to regulate numerous cellular functions.
1 Q8VDQ8 (/ISO)
Negative regulation of angiogenesis GO:0016525
Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis.
1 Q7ZVK3 (/IMP)
Histone deacetylation GO:0016575
The modification of histones by removal of acetyl groups.
1 Q8VDQ8 (/IGI)
Myelination in peripheral nervous system GO:0022011
The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.
1 Q8VDQ8 (/ISO)
Chromatin silencing at centromere GO:0030702
Repression of transcription of centromeric DNA by altering the structure of chromatin.
1 Q9USN7 (/IMP)
Regulation of myelination GO:0031641
Any process that modulates the frequency, rate or extent of the formation of a myelin sheath around nerve axons.
1 Q8VDQ8 (/ISO)
Positive regulation of insulin secretion GO:0032024
Any process that activates or increases the frequency, rate or extent of the regulated release of insulin.
1 Q8R104 (/ISO)
Positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436
Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
1 Q8VDQ8 (/IMP)
Cellular response to oxidative stress GO:0034599
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
1 Q8VDQ8 (/IDA)
Peptidyl-lysine deacetylation GO:0034983
The removal of an acetyl group from an acetylated lysine residue in a peptide or protein.
1 Q9NTG7 (/IMP)
Cellular response to hepatocyte growth factor stimulus GO:0035729
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.
1 Q8VDQ8 (/ISO)
Negative regulation of protein catabolic process GO:0042177
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
1 Q8VDQ8 (/ISO)
Negative regulation of apoptotic process GO:0043066
Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
1 Q5RJQ4 (/IMP)
Negative regulation of apoptotic process GO:0043066
Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
1 Q8VDQ8 (/ISO)
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
1 Q8VDQ8 (/ISO)
Positive regulation of DNA binding GO:0043388
Any process that increases the frequency, rate or extent of DNA binding. DNA binding is any process in which a gene product interacts selectively with DNA (deoxyribonucleic acid).
1 Q8VDQ8 (/IDA)
Protein kinase B signaling GO:0043491
A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B (also called AKT), which occurs as a result of a single trigger reaction or compound.
1 Q8VDQ8 (/ISO)
Cellular lipid catabolic process GO:0044242
The chemical reactions and pathways resulting in the breakdown of lipids, as carried out by individual cells.
1 Q8VDQ8 (/IMP)
Regulation of fat cell differentiation GO:0045598
Any process that modulates the frequency, rate or extent of adipocyte differentiation.
1 Q8VDQ8 (/IMP)
Negative regulation of fat cell differentiation GO:0045599
Any process that stops, prevents, or reduces the frequency, rate or extent of adipocyte differentiation.
1 Q8VDQ8 (/IMP)
Positive regulation of meiotic nuclear division GO:0045836
Any process that activates or increases the frequency, rate or extent of meiosis.
1 Q8VDQ8 (/IMP)
Negative regulation of striated muscle tissue development GO:0045843
Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle development.
1 Q8VDQ8 (/ISO)
Negative regulation of striated muscle tissue development GO:0045843
Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle development.
1 Q8VDQ8 (/ISS)
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
1 Q8VDQ8 (/ISO)
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
1 Q8VDQ8 (/ISS)
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
1 Q8VDQ8 (/IMP)
Hepatocyte growth factor receptor signaling pathway GO:0048012
The series of molecular signals generated as a consequence of the hepatocyte growth factor receptor binding to one of its physiological ligands.
1 Q8VDQ8 (/ISO)
Negative regulation of oligodendrocyte differentiation GO:0048715
Any process that stops, prevents, or reduces the frequency, rate or extent of oligodendrocyte differentiation.
1 Q5RJQ4 (/IMP)
Negative regulation of oligodendrocyte differentiation GO:0048715
Any process that stops, prevents, or reduces the frequency, rate or extent of oligodendrocyte differentiation.
1 Q8VDQ8 (/ISO)
Regulation of cell cycle GO:0051726
Any process that modulates the rate or extent of progression through the cell cycle.
1 Q8VDQ8 (/ISO)
Positive regulation of cell division GO:0051781
Any process that activates or increases the frequency, rate or extent of cell division.
1 Q8VDQ8 (/IMP)
Positive regulation of attachment of spindle microtubules to kinetochore GO:0051987
Any process that activates or increases the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.
1 Q8VDQ8 (/IMP)
Cilium assembly GO:0060271
The assembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.
1 Q7ZVK3 (/IMP)
Regulation of nucleosome density GO:0060303
Any process that modulates the number of nucleosomes in a given region of a chromosome.
1 Q9USN7 (/IEP)
Negative regulation of transcription from RNA polymerase II promoter in response to hypoxia GO:0061428
Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus.
1 Q8VDQ8 (/ISO)
Cellular response to caloric restriction GO:0061433
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of caloric restriction, insufficient food energy intake.
1 Q8VDQ8 (/IDA)
Negative regulation of ERK1 and ERK2 cascade GO:0070373
Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.
1 Q8R104 (/ISO)
Negative regulation of oligodendrocyte progenitor proliferation GO:0070446
Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation.
1 Q5RJQ4 (/IMP)
Negative regulation of oligodendrocyte progenitor proliferation GO:0070446
Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation.
1 Q8VDQ8 (/ISO)
Histone H3 deacetylation GO:0070932
The modification of histone H3 by the removal of one or more acetyl groups.
1 Q8VDQ8 (/ISO)
Histone H4 deacetylation GO:0070933
The modification of histone H4 by the removal of one or more acetyl groups.
1 Q8VDQ8 (/IMP)
Histone H4 deacetylation GO:0070933
The modification of histone H4 by the removal of one or more acetyl groups.
1 Q8VDQ8 (/ISO)
Cellular response to molecule of bacterial origin GO:0071219
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.
1 Q8VDQ8 (/ISO)
Cellular response to hypoxia GO:0071456
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
1 Q8VDQ8 (/ISO)
Cellular response to epinephrine stimulus GO:0071872
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epinephrine stimulus. Epinephrine is a catecholamine that has the formula C9H13NO3; it is secreted by the adrenal medulla to act as a hormone, and released by certain neurons to act as a neurotransmitter active in the central nervous system.
1 Q8VDQ8 (/IDA)
Tubulin deacetylation GO:0090042
The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic
1 Q8VDQ8 (/IGI)
Tubulin deacetylation GO:0090042
The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic
1 Q8VDQ8 (/ISO)
Regulation of postsynaptic neurotransmitter receptor internalization GO:0099149
Any process that modulates the frequency, rate or extent of endocytosis of neurotransmitter receptor at the postsynapse.
1 Q5RJQ4 (/EXP)
Regulation of postsynaptic neurotransmitter receptor internalization GO:0099149
Any process that modulates the frequency, rate or extent of endocytosis of neurotransmitter receptor at the postsynapse.
1 Q5RJQ4 (/IDA)
Regulation of postsynaptic neurotransmitter receptor internalization GO:0099149
Any process that modulates the frequency, rate or extent of endocytosis of neurotransmitter receptor at the postsynapse.
1 Q5RJQ4 (/IMP)
Regulation of postsynaptic neurotransmitter receptor internalization GO:0099149
Any process that modulates the frequency, rate or extent of endocytosis of neurotransmitter receptor at the postsynapse.
1 Q8VDQ8 (/ISO)
Positive regulation of execution phase of apoptosis GO:1900119
Any process that activates or increases the frequency, rate or extent of execution phase of apoptosis.
1 Q8VDQ8 (/IMP)
Positive regulation of oocyte maturation GO:1900195
Any process that activates or increases the frequency, rate or extent of oocyte maturation.
1 Q8VDQ8 (/IMP)
Negative regulation of NLRP3 inflammasome complex assembly GO:1900226
Any process that stops, prevents or reduces the frequency, rate or extent of NLRP3 inflammasome complex assembly.
1 Q8VDQ8 (/IMP)
Regulation of transport by negative regulation of transcription from RNA polymerase II promoter GO:1900392
A negative regulation of transcription from RNA polymerase II promoter that results in regulation of transport.
1 Q9USN7 (/IC)
Negative regulation of defense response to bacterium GO:1900425
Any process that stops, prevents or reduces the frequency, rate or extent of defense response to bacterium.
1 Q8VDQ8 (/ISO)
Positive regulation of mitochondrial transcription GO:1903109
Any process that activates or increases the frequency, rate or extent of transcription occuring in the mitochondrion.
1 Q8R104 (/IMP)
Histone H3-K9 deacetylation GO:1990619
The modification of histone H3 by the removal of an acetyl group from lysine at position 9 of the histone.
1 Q9USN7 (/IMP)
Negative regulation of reactive oxygen species metabolic process GO:2000378
Any process that stops, prevents or reduces the frequency, rate or extent of reactive oxygen species metabolic process.
1 Q8R104 (/ISO)
Negative regulation of peptidyl-lysine acetylation GO:2000757
Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-lysine acetylation.
1 Q8R104 (/IDA)
Negative regulation of peptidyl-lysine acetylation GO:2000757
Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-lysine acetylation.
1 Q8R104 (/IMP)
Positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia GO:2000777
Any positive regulation of proteasomal ubiquitin-dependent protein catabolic process that is involved in a cellular response to hypoxia.
1 Q8VDQ8 (/ISO)

There are 94 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS) Q9I7I7 (/ISS) Q9I7I7 (/ISS)
Nuclear heterochromatin GO:0005720
A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8VDQ8 (/ISS)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS) Q9I7I7 (/ISS) Q9I7I7 (/ISS)
Paranodal junction GO:0033010
A highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. It flanks the node of Ranvier in myelinated nerve and electrically isolates the myelinated from unmyelinated nerve segments and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Paranode region of axon GO:0033270
An axon part that is located adjacent to the nodes of Ranvier and surrounded by lateral loop portions of myelin sheath.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8VDQ8 (/ISS)
Perikaryon GO:0043204
The portion of the cell soma (neuronal cell body) that excludes the nucleus.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Myelin sheath GO:0043209
An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Schmidt-Lanterman incisure GO:0043220
Regions within compact myelin in which the cytoplasmic faces of the enveloping myelin sheath are not tightly juxtaposed, and include cytoplasm from the cell responsible for making the myelin. Schmidt-Lanterman incisures occur in the compact myelin internode, while lateral loops are analogous structures found in the paranodal region adjacent to the nodes of Ranvier.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Juxtaparanode region of axon GO:0044224
A region of an axon near a node of Ranvier that is between the paranode and internode regions.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8VDQ8 (/ISS)
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Meiotic spindle GO:0072687
A spindle that forms as part of meiosis. Several proteins, such as budding yeast Spo21p, fission yeast Spo2 and Spo13, and C. elegans mei-1, localize specifically to the meiotic spindle and are absent from the mitotic spindle.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS)
Glial cell projection GO:0097386
A prolongation or process extending from a glial cell.
9 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q7ZVK3 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8VDQ8 (/ISS)
Lateral loop GO:0043219
Non-compact myelin located adjacent to the nodes of Ranvier in a myelin segment. These non-compact regions include cytoplasm from the cell responsible for synthesizing the myelin. Lateral loops are found in the paranodal region adjacent to the nodes of Ranvier, while Schmidt-Lantermann clefts are analogous structures found within the compact myelin internode.
8 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8IXJ6 (/ISS) Q8VDQ8 (/ISS)
Chromosome GO:0005694
A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
7 A0A024R0G8 (/IDA) A0A024R0G8 (/IDA) A0A024R0G8 (/IDA) A0A087WYM3 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Centriole GO:0005814
A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Spindle GO:0005819
The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
7 A0A024R0G8 (/IDA) A0A024R0G8 (/IDA) A0A024R0G8 (/IDA) A0A087WYM3 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
7 A0A024R0G8 (/IDA) A0A024R0G8 (/IDA) A0A024R0G8 (/IDA) A0A087WYM3 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Midbody GO:0030496
A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Mitotic spindle GO:0072686
A spindle that forms as part of mitosis. Mitotic and meiotic spindles contain distinctive complements of proteins associated with microtubules.
7 Q4R834 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RBF1 (/ISS) Q5RJQ4 (/ISS) Q7ZVK3 (/ISS) Q8VDQ8 (/ISS)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
6 Q5RJQ4 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8VDQ8 (/IDA) Q9USN7 (/IDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
5 Q5RJQ4 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8VDQ8 (/IDA)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
5 B2RZ31 (/IDA) C6ZII9 (/IDA) Q8R104 (/IDA) Q8VDQ8 (/IDA) Q9NTG7 (/IDA)
Midbody GO:0030496
A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis.
4 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8VDQ8 (/IDA)
Chromatin silencing complex GO:0005677
Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing.
3 Q8IXJ6 (/NAS) Q8IXJ6 (/NAS) Q8IXJ6 (/NAS)
Chromosome GO:0005694
A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Centriole GO:0005814
A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Spindle GO:0005819
The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Microtubule GO:0005874
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Mitotic spindle GO:0072686
A spindle that forms as part of mitosis. Mitotic and meiotic spindles contain distinctive complements of proteins associated with microtubules.
3 Q8IXJ6 (/IDA) Q8IXJ6 (/IDA) Q8IXJ6 (/IDA)
Mitochondrial matrix GO:0005759
The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
2 Q8R104 (/IDA) Q9NTG7 (/IDA)
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
2 Q8R104 (/IDA) Q9NTG7 (/IDA)
Paranodal junction GO:0033010
A highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. It flanks the node of Ranvier in myelinated nerve and electrically isolates the myelinated from unmyelinated nerve segments and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath.
2 Q5RJQ4 (/IDA) Q8VDQ8 (/IDA)
Perikaryon GO:0043204
The portion of the cell soma (neuronal cell body) that excludes the nucleus.
2 Q5RJQ4 (/IDA) Q8VDQ8 (/IDA)
Myelin sheath GO:0043209
An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.
2 Q5RJQ4 (/IDA) Q8VDQ8 (/IDA)
Schmidt-Lanterman incisure GO:0043220
Regions within compact myelin in which the cytoplasmic faces of the enveloping myelin sheath are not tightly juxtaposed, and include cytoplasm from the cell responsible for making the myelin. Schmidt-Lanterman incisures occur in the compact myelin internode, while lateral loops are analogous structures found in the paranodal region adjacent to the nodes of Ranvier.
2 Q5RJQ4 (/IDA) Q8VDQ8 (/IDA)
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
1 Q9USN7 (/IDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q8VDQ8 (/ISO)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
1 Q9NTG7 (/TAS)
Chromosome GO:0005694
A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.
1 Q8VDQ8 (/ISO)
Nuclear heterochromatin GO:0005720
A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin.
1 Q5RJQ4 (/IDA)
Nuclear heterochromatin GO:0005720
A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin.
1 Q8VDQ8 (/ISO)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
1 Q8VDQ8 (/ISO)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 Q8VDQ8 (/HDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 Q8VDQ8 (/ISO)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
1 Q8R104 (/HDA)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
1 Q8R104 (/ISO)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
1 Q8R104 (/ISS)
Mitochondrial inner membrane GO:0005743
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
1 Q8R104 (/IDA)
Mitochondrial matrix GO:0005759
The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
1 Q8R104 (/ISO)
Mitochondrial matrix GO:0005759
The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
1 Q9NTG7 (/TAS)
Centrosome GO:0005813
A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
1 Q8VDQ8 (/ISO)
Centriole GO:0005814
A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle.
1 Q8VDQ8 (/ISO)
Spindle GO:0005819
The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
1 Q8VDQ8 (/ISO)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 Q9USN7 (/HDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 Q8VDQ8 (/ISO)
Microtubule GO:0005874
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
1 Q8VDQ8 (/ISO)
Microtubule GO:0005874
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
1 Q8VDQ8 (/ISS)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
1 Q8VDQ8 (/ISO)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
1 Q8R104 (/IDA)
Midbody GO:0030496
A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis.
1 Q8VDQ8 (/ISO)
Nuclear pericentric heterochromatin GO:0031618
Nuclear heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
1 Q9USN7 (/IDA)
Mating-type region heterochromatin GO:0031934
Heterochromatic regions of the chromosome found at silenced mating-type loci.
1 Q9USN7 (/IDA)
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
1 Q8R104 (/ISO)
Paranodal junction GO:0033010
A highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. It flanks the node of Ranvier in myelinated nerve and electrically isolates the myelinated from unmyelinated nerve segments and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath.
1 Q8VDQ8 (/ISO)
Paranode region of axon GO:0033270
An axon part that is located adjacent to the nodes of Ranvier and surrounded by lateral loop portions of myelin sheath.
1 Q5RJQ4 (/IDA)
Paranode region of axon GO:0033270
An axon part that is located adjacent to the nodes of Ranvier and surrounded by lateral loop portions of myelin sheath.
1 Q8VDQ8 (/ISO)
Myelin sheath abaxonal region GO:0035748
The region of the myelin sheath furthest from the axon.
1 Q5RJQ4 (/IDA)
Myelin sheath abaxonal region GO:0035748
The region of the myelin sheath furthest from the axon.
1 Q8VDQ8 (/ISO)
Perikaryon GO:0043204
The portion of the cell soma (neuronal cell body) that excludes the nucleus.
1 Q8VDQ8 (/ISO)
Myelin sheath GO:0043209
An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.
1 Q8VDQ8 (/HDA)
Myelin sheath GO:0043209
An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.
1 Q8VDQ8 (/ISO)
Lateral loop GO:0043219
Non-compact myelin located adjacent to the nodes of Ranvier in a myelin segment. These non-compact regions include cytoplasm from the cell responsible for synthesizing the myelin. Lateral loops are found in the paranodal region adjacent to the nodes of Ranvier, while Schmidt-Lantermann clefts are analogous structures found within the compact myelin internode.
1 Q5RJQ4 (/IDA)
Lateral loop GO:0043219
Non-compact myelin located adjacent to the nodes of Ranvier in a myelin segment. These non-compact regions include cytoplasm from the cell responsible for synthesizing the myelin. Lateral loops are found in the paranodal region adjacent to the nodes of Ranvier, while Schmidt-Lantermann clefts are analogous structures found within the compact myelin internode.
1 Q8VDQ8 (/ISO)
Schmidt-Lanterman incisure GO:0043220
Regions within compact myelin in which the cytoplasmic faces of the enveloping myelin sheath are not tightly juxtaposed, and include cytoplasm from the cell responsible for making the myelin. Schmidt-Lanterman incisures occur in the compact myelin internode, while lateral loops are analogous structures found in the paranodal region adjacent to the nodes of Ranvier.
1 Q8VDQ8 (/ISO)
Juxtaparanode region of axon GO:0044224
A region of an axon near a node of Ranvier that is between the paranode and internode regions.
1 Q5RJQ4 (/IDA)
Juxtaparanode region of axon GO:0044224
A region of an axon near a node of Ranvier that is between the paranode and internode regions.
1 Q8VDQ8 (/ISO)
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
1 Q8VDQ8 (/IDA)
Mitotic spindle GO:0072686
A spindle that forms as part of mitosis. Mitotic and meiotic spindles contain distinctive complements of proteins associated with microtubules.
1 Q8VDQ8 (/ISO)
Meiotic spindle GO:0072687
A spindle that forms as part of meiosis. Several proteins, such as budding yeast Spo21p, fission yeast Spo2 and Spo13, and C. elegans mei-1, localize specifically to the meiotic spindle and are absent from the mitotic spindle.
1 Q8VDQ8 (/IDA)
Glial cell projection GO:0097386
A prolongation or process extending from a glial cell.
1 Q5RJQ4 (/IDA)
Glial cell projection GO:0097386
A prolongation or process extending from a glial cell.
1 Q8VDQ8 (/ISO)
Terminal loop GO:0097456
Portion of myelin-forming Schwann cell consisting of terminal cytoplasmic extensions adhered to the axon at the beginning and end of the myelin sheath.
1 Q5RJQ4 (/IDA)
Terminal loop GO:0097456
Portion of myelin-forming Schwann cell consisting of terminal cytoplasmic extensions adhered to the axon at the beginning and end of the myelin sheath.
1 Q8VDQ8 (/ISO)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
1 Q5RJQ4 (/EXP)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
1 Q5RJQ4 (/IDA)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
1 Q5RJQ4 (/IMP)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
1 Q8VDQ8 (/ISO)
Nuclear rDNA heterochromatin GO:1902377
Any rDNA heterochromatin that is part of a nucleus.
1 Q9USN7 (/IDA)
Nuclear subtelomeric heterochromatin GO:1990707
Heterochromatic regions of the chromosome found at the subtelomeric regions of a chromosome in the nucleus.
1 Q9USN7 (/IDA)
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