The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Periplasmic binding protein-like II
".
FunFam 104: Peptide ABC transporter substrate-binding protein
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Oligopeptide transmembrane transporter activity GO:0035673
Enables the transfer of oligopeptides from one side of a membrane to the other. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.
|
4 | Q9I2T4 (/IMP) Q9I2T4 (/IMP) Q9I2T4 (/IMP) Q9I2T4 (/IMP) |
|
ATPase-coupled transmembrane transporter activity GO:0042626
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.
|
4 | Q9KLZ8 (/ISS) Q9KLZ8 (/ISS) Q9KLZ8 (/ISS) Q9KLZ8 (/ISS) |
|
Peptide transmembrane transporter activity GO:1904680
Enables the transfer of a peptide from one side of a membrane to the other.
|
4 | Q9KLZ8 (/ISS) Q9KLZ8 (/ISS) Q9KLZ8 (/ISS) Q9KLZ8 (/ISS) |
|
ATPase-coupled peptide transmembrane transporter activity GO:0015440
Catalysis of the reaction: ATP + H2O + peptide(in) = ADP + phosphate + peptide(out). Peptides exported include alpha-hemolysin, cyclolysin, colicin V and siderophores from Gram-negative bacteria, and bacteriocin, subtilin, competence factor and pediocin from Gram-positive bacteria.
|
1 | Q88AW6 (/TAS) |
There are 5 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Oligopeptide transport GO:0006857
The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.
|
9 | P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) |
|
Microcin transport GO:0042884
The directed movement of microcin, a class of glycine-rich, bactericidal peptides (antibiotics) produced by some enteric bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
9 | P33913 (/IMP) P33913 (/IMP) P33913 (/IMP) P33913 (/IMP) P33913 (/IMP) P33913 (/IMP) P33913 (/IMP) P33913 (/IMP) P33913 (/IMP) |
|
Oligopeptide transport GO:0006857
The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.
|
4 | Q9I2T4 (/IMP) Q9I2T4 (/IMP) Q9I2T4 (/IMP) Q9I2T4 (/IMP) |
|
Peptide transport GO:0015833
The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
4 | Q9KLZ8 (/ISS) Q9KLZ8 (/ISS) Q9KLZ8 (/ISS) Q9KLZ8 (/ISS) |
|
Peptide transport GO:0015833
The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
1 | Q88AW6 (/TAS) |
There are 3 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Outer membrane-bounded periplasmic space GO:0030288
The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.
|
9 | P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) P33913 (/IDA) |
|
Outer membrane-bounded periplasmic space GO:0030288
The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.
|
1 | Q88AW6 (/TAS) |
|
ATP-binding cassette (ABC) transporter complex GO:0043190
A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter.
|
1 | Q88AW6 (/TAS) |
