The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: 50S ribosomal protein L4

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 5 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
DNA-binding transcription repressor activity GO:0001217
Interacting selectively and non-covalently with a specific DNA sequence in order to stop, prevent, or reduce the frequency, rate or extent of transcription by a RNA polymerase.
390 P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP)
(380 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
390 P60723 (/IPI) P60723 (/IPI) P60723 (/IPI) P60723 (/IPI) P60723 (/IPI) P60723 (/IPI) P60723 (/IPI) P60723 (/IPI) P60723 (/IPI) P60723 (/IPI)
(380 more)
Translation repressor activity GO:0030371
Antagonizes ribosome-mediated translation of mRNA into a polypeptide.
390 P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA)
(380 more)
Endoribonuclease inhibitor activity GO:0060698
Stops, prevents or reduces the activity of an endoribonuclease, any enzyme that catalyzes the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.
390 P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA)
(380 more)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
14 Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS)
(4 more)

There are 5 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Negative regulation of translation GO:0017148
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
390 P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP)
(380 more)
Ribosome assembly GO:0042255
The aggregation, arrangement and bonding together of the mature ribosome and of its subunits.
390 P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP)
(380 more)
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
390 P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP)
(380 more)
Negative regulation of endoribonuclease activity GO:0060702
Any process that decreases the rate, frequency or extent of the catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.
390 P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA)
(380 more)
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
14 Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS)
(4 more)

There are 6 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
390 P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA)
(380 more)
Large ribosomal subunit GO:0015934
The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
390 P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP)
(380 more)
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
390 P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA) P60723 (/IDA)
(380 more)
Protein-DNA complex GO:0032993
A macromolecular complex containing both protein and DNA molecules.
390 P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP)
(380 more)
Polysomal ribosome GO:0042788
A ribosome bound to mRNA that forms part of a polysome.
390 P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP) P60723 (/IMP)
(380 more)
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
14 Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS) Q9KNY5 (/ISS)
(4 more)
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