The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
RNA Cap, Translation Initiation Factor Eif4e
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 11: Eukaryotic translation initiation factor 4E

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 5 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Translation initiation factor activity GO:0003743
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
11 P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS)
(1 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
11 P07260 (/IPI) P07260 (/IPI) P07260 (/IPI) P07260 (/IPI) P07260 (/IPI) P07260 (/IPI) P07260 (/IPI) P07260 (/IPI) P07260 (/IPI) P07260 (/IPI)
(1 more)
Phosphatidylinositol-3-phosphate binding GO:0032266
Interacting selectively and non-covalently with phosphatidylinositol-3-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3' position.
11 P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA)
(1 more)
MRNA cap binding GO:0098808
Interacting selectively and non-covalently with a 7-methylguanosine (m7G) group or derivative located at the 5' end of an mRNA molecule.
11 P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA)
(1 more)
Translation initiation factor activity GO:0003743
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
2 Q9P975 (/IGI) Q9P975 (/IGI)

There are 4 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
11 P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA)
(1 more)
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
11 P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS) P07260 (/ISS)
(1 more)
Regulation of cell cycle GO:0051726
Any process that modulates the rate or extent of progression through the cell cycle.
11 P07260 (/IMP) P07260 (/IMP) P07260 (/IMP) P07260 (/IMP) P07260 (/IMP) P07260 (/IMP) P07260 (/IMP) P07260 (/IMP) P07260 (/IMP) P07260 (/IMP)
(1 more)
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
2 Q9P975 (/IGI) Q9P975 (/IGI)

There are 6 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
11 P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA)
(1 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
11 P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA)
(1 more)
Ribosome GO:0005840
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
11 P07260 (/TAS) P07260 (/TAS) P07260 (/TAS) P07260 (/TAS) P07260 (/TAS) P07260 (/TAS) P07260 (/TAS) P07260 (/TAS) P07260 (/TAS) P07260 (/TAS)
(1 more)
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
11 P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA)
(1 more)
Eukaryotic translation initiation factor 4F complex GO:0016281
The eukaryotic translation initiation factor 4F complex is composed of eIF4E, eIF4A and eIF4G; it is involved in the recognition of the mRNA cap, ATP-dependent unwinding of the 5'-terminal secondary structure and recruitment of the mRNA to the ribosome.
11 P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA) P07260 (/IDA)
(1 more)
MRNA cap binding complex GO:0005845
Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA.
2 Q9P975 (/ISS) Q9P975 (/ISS)
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