CATH Superfamily 3.30.720.90
The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 2: 60S ribosomal proteins L38
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 3 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
8 | P49167 (/IC) P49167 (/IC) P49167 (/IC) P49167 (/IC) P49167 (/IC) P49167 (/IC) P49167 (/IC) P49167 (/IC) |
|
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
6 | Q38BR9 (/ISM) Q38BR9 (/ISM) Q38BR9 (/ISM) Q38BR9 (/ISM) Q38FV6 (/ISM) Q38FV6 (/ISM) |
|
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
4 | A0A1D8PG16 (/NAS) A0A1D8PG16 (/NAS) A0A1D8PG16 (/NAS) A0A1D8PG16 (/NAS) |
There are 3 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cytoplasmic translation GO:0002181
The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
|
8 | P49167 (/IC) P49167 (/IC) P49167 (/IC) P49167 (/IC) P49167 (/IC) P49167 (/IC) P49167 (/IC) P49167 (/IC) |
|
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
6 | Q38BR9 (/ISM) Q38BR9 (/ISM) Q38BR9 (/ISM) Q38BR9 (/ISM) Q38FV6 (/ISM) Q38FV6 (/ISM) |
|
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
4 | A0A1D8PG16 (/NAS) A0A1D8PG16 (/NAS) A0A1D8PG16 (/NAS) A0A1D8PG16 (/NAS) |
There are 11 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
8 | P49167 (/IDA) P49167 (/IDA) P49167 (/IDA) P49167 (/IDA) P49167 (/IDA) P49167 (/IDA) P49167 (/IDA) P49167 (/IDA) |
|
Ribosome GO:0005840
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
|
6 | Q38BR9 (/ISM) Q38BR9 (/ISM) Q38BR9 (/ISM) Q38BR9 (/ISM) Q38FV6 (/ISM) Q38FV6 (/ISM) |
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
5 | Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) |
|
Nuclear lumen GO:0031981
The volume enclosed by the nuclear inner membrane.
|
5 | Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) |
|
Ciliary plasm GO:0097014
All of the contents of a cilium, excluding the plasma membrane surrounding the cilium.
|
5 | Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) Q4Q8X0 (/ISO) |
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
4 | Q38BR9 (/IDA) Q38BR9 (/IDA) Q38BR9 (/IDA) Q38BR9 (/IDA) |
|
Yeast-form cell wall GO:0030445
The wall surrounding a cell of a dimorphic fungus growing in the single-cell budding yeast form, in contrast to the filamentous or hyphal form.
|
4 | A0A1D8PG16 (/IDA) A0A1D8PG16 (/IDA) A0A1D8PG16 (/IDA) A0A1D8PG16 (/IDA) |
|
Hyphal cell wall GO:0030446
The cell wall surrounding a fungal hypha.
|
4 | A0A1D8PG16 (/IDA) A0A1D8PG16 (/IDA) A0A1D8PG16 (/IDA) A0A1D8PG16 (/IDA) |
|
Nuclear lumen GO:0031981
The volume enclosed by the nuclear inner membrane.
|
4 | Q38BR9 (/IDA) Q38BR9 (/IDA) Q38BR9 (/IDA) Q38BR9 (/IDA) |
|
Ciliary plasm GO:0097014
All of the contents of a cilium, excluding the plasma membrane surrounding the cilium.
|
4 | Q38BR9 (/IDA) Q38BR9 (/IDA) Q38BR9 (/IDA) Q38BR9 (/IDA) |
|
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
1 | Q55GJ7 (/ISS) |
