The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 36: polypyrimidine tract-binding protein 1 isoform X2
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 22 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
24 |
O95758 (/HDA)
O95758 (/HDA)
O95758 (/HDA)
P26599 (/HDA)
P26599 (/HDA)
P26599 (/HDA)
Q9UKA9 (/HDA)
Q9UKA9 (/HDA)
Q9UKA9 (/HDA)
Q9UKA9 (/HDA)
(14 more) |
Translation repressor activity, mRNA regulatory element binding GO:0000900
Antagonizes the ribosome-mediated translation of mRNA into a polypeptide via direct binding (through a selective and non-covalent interaction) to nucleic acid.
|
11 |
A0A0B4K6P4 (/IMP)
A0A0B4K6W9 (/IMP)
A0A0B4LHY1 (/IMP)
A8JRI1 (/IMP)
E1JJ45 (/IMP)
Q3T7F7 (/IMP)
Q7KES3 (/IMP)
Q7KRS7 (/IMP)
Q8IMF8 (/IMP)
Q8WR53 (/IMP)
(1 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
11 |
A0A0B4K6P4 (/ISS)
A0A0B4K6W9 (/ISS)
A0A0B4LHY1 (/ISS)
A8JRI1 (/ISS)
E1JJ45 (/ISS)
Q3T7F7 (/ISS)
Q7KES3 (/ISS)
Q7KRS7 (/ISS)
Q8IMF8 (/ISS)
Q8WR53 (/ISS)
(1 more) |
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
|
11 |
A0A0B4K6P4 (/IDA)
A0A0B4K6W9 (/IDA)
A0A0B4LHY1 (/IDA)
A8JRI1 (/IDA)
E1JJ45 (/IDA)
Q3T7F7 (/IDA)
Q7KES3 (/IDA)
Q7KRS7 (/IDA)
Q8IMF8 (/IDA)
Q8WR53 (/IDA)
(1 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
6 | O95758 (/TAS) O95758 (/TAS) O95758 (/TAS) P26599 (/TAS) P26599 (/TAS) P26599 (/TAS) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
6 | P17225 (/IPI) P26599 (/IPI) P26599 (/IPI) P26599 (/IPI) Q91Z31 (/IPI) Q91Z31 (/IPI) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
3 | Q00438 (/IDA) Q91Z31 (/IDA) Q91Z31 (/IDA) |
Poly-pyrimidine tract binding GO:0008187
Interacting selectively and non-covalently with any stretch of pyrimidines (cytosine or uracil) in an RNA molecule.
|
3 | P26599 (/TAS) P26599 (/TAS) P26599 (/TAS) |
Pre-mRNA binding GO:0036002
Interacting selectively and non-covalently with pre-messenger RNA (pre-mRNA), an intermediate molecule between DNA and protein that may contain introns and, at least in part, encodes one or more proteins. Introns are removed from pre-mRNA to form a mRNA molecule.
|
3 | P26599 (/IDA) P26599 (/IDA) P26599 (/IDA) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
2 | Q18999 (/ISS) Q8T3E6 (/ISS) |
Showing 1 to 10 of 22 entries
There are 61 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Negative regulation of RNA splicing GO:0033119
Any process that stops, prevents, or reduces the frequency, rate or extent of RNA splicing.
|
24 |
O95758 (/IDA)
O95758 (/IDA)
O95758 (/IDA)
P26599 (/IDA)
P26599 (/IDA)
P26599 (/IDA)
Q9UKA9 (/IDA)
Q9UKA9 (/IDA)
Q9UKA9 (/IDA)
Q9UKA9 (/IDA)
(14 more) |
Spermatid development GO:0007286
The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.
|
11 |
A0A0B4K6P4 (/IMP)
A0A0B4K6W9 (/IMP)
A0A0B4LHY1 (/IMP)
A8JRI1 (/IMP)
E1JJ45 (/IMP)
Q3T7F7 (/IMP)
Q7KES3 (/IMP)
Q7KRS7 (/IMP)
Q8IMF8 (/IMP)
Q8WR53 (/IMP)
(1 more) |
Sperm individualization GO:0007291
The resolution of the male germline syncytium or cyst into individual gametes by packaging each spermatid into its own plasma membrane.
|
11 |
A0A0B4K6P4 (/IMP)
A0A0B4K6W9 (/IMP)
A0A0B4LHY1 (/IMP)
A8JRI1 (/IMP)
E1JJ45 (/IMP)
Q3T7F7 (/IMP)
Q7KES3 (/IMP)
Q7KRS7 (/IMP)
Q8IMF8 (/IMP)
Q8WR53 (/IMP)
(1 more) |
Negative regulation of oskar mRNA translation GO:0007319
Any process that stops, prevents or reduces the rate that oskar mRNAs are effectively translated into protein.
|
11 |
A0A0B4K6P4 (/IMP)
A0A0B4K6W9 (/IMP)
A0A0B4LHY1 (/IMP)
A8JRI1 (/IMP)
E1JJ45 (/IMP)
Q3T7F7 (/IMP)
Q7KES3 (/IMP)
Q7KRS7 (/IMP)
Q8IMF8 (/IMP)
Q8WR53 (/IMP)
(1 more) |
Oocyte microtubule cytoskeleton polarization GO:0008103
Establishment and maintenance of a specific axis of polarity of the oocyte microtubule network. The axis is set so that the minus and plus ends of the microtubules of the mid stage oocyte are positioned along the anterior cortex and at the posterior pole, respectively. An example of this is found in Drosophila melanogaster.
|
11 |
A0A0B4K6P4 (/IMP)
A0A0B4K6W9 (/IMP)
A0A0B4LHY1 (/IMP)
A8JRI1 (/IMP)
E1JJ45 (/IMP)
Q3T7F7 (/IMP)
Q7KES3 (/IMP)
Q7KRS7 (/IMP)
Q8IMF8 (/IMP)
Q8WR53 (/IMP)
(1 more) |
Imaginal disc-derived wing vein morphogenesis GO:0008586
The process in which anatomical structures of the veins on an imaginal disc-derived wing are generated and organized.
|
11 |
A0A0B4K6P4 (/IMP)
A0A0B4K6W9 (/IMP)
A0A0B4LHY1 (/IMP)
A8JRI1 (/IMP)
E1JJ45 (/IMP)
Q3T7F7 (/IMP)
Q7KES3 (/IMP)
Q7KRS7 (/IMP)
Q8IMF8 (/IMP)
Q8WR53 (/IMP)
(1 more) |
Imaginal disc-derived wing margin morphogenesis GO:0008587
The process in which the anatomical structures of the imaginal disc-derived wing margin are generated and organized. The wing margin is a strip of cells in the third instar disc at the boundary between the presumptive dorsal and ventral surfaces of the wing blade.
|
11 |
A0A0B4K6P4 (/IMP)
A0A0B4K6W9 (/IMP)
A0A0B4LHY1 (/IMP)
A8JRI1 (/IMP)
E1JJ45 (/IMP)
Q3T7F7 (/IMP)
Q7KES3 (/IMP)
Q7KRS7 (/IMP)
Q8IMF8 (/IMP)
Q8WR53 (/IMP)
(1 more) |
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
4 | P17225 (/ISS) Q00438 (/ISS) Q29099 (/ISS) Q8WN55 (/ISS) |
Negative regulation of RNA splicing GO:0033119
Any process that stops, prevents, or reduces the frequency, rate or extent of RNA splicing.
|
4 | P17225 (/ISO) Q8BHD7 (/ISO) Q91Z31 (/ISO) Q91Z31 (/ISO) |
Negative regulation of mRNA splicing, via spliceosome GO:0048025
Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.
|
4 | P17225 (/IDA) P26599 (/IDA) P26599 (/IDA) P26599 (/IDA) |
Showing 1 to 10 of 61 entries
There are 19 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
12 |
A0A0B4K6P4 (/IDA)
A0A0B4K6W9 (/IDA)
A0A0B4LHY1 (/IDA)
A8JRI1 (/IDA)
E1JJ45 (/IDA)
Q00438 (/IDA)
Q3T7F7 (/IDA)
Q7KES3 (/IDA)
Q7KRS7 (/IDA)
Q8IMF8 (/IDA)
(2 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
11 |
A0A0B4K6P4 (/HDA)
A0A0B4K6W9 (/HDA)
A0A0B4LHY1 (/HDA)
A8JRI1 (/HDA)
E1JJ45 (/HDA)
Q3T7F7 (/HDA)
Q7KES3 (/HDA)
Q7KRS7 (/HDA)
Q8IMF8 (/HDA)
Q8WR53 (/HDA)
(1 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
11 |
A0A0B4K6P4 (/HDA)
A0A0B4K6W9 (/HDA)
A0A0B4LHY1 (/HDA)
A8JRI1 (/HDA)
E1JJ45 (/HDA)
Q3T7F7 (/HDA)
Q7KES3 (/HDA)
Q7KRS7 (/HDA)
Q8IMF8 (/HDA)
Q8WR53 (/HDA)
(1 more) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
11 |
A0A0B4K6P4 (/IDA)
A0A0B4K6W9 (/IDA)
A0A0B4LHY1 (/IDA)
A8JRI1 (/IDA)
E1JJ45 (/IDA)
Q3T7F7 (/IDA)
Q7KES3 (/IDA)
Q7KRS7 (/IDA)
Q8IMF8 (/IDA)
Q8WR53 (/IDA)
(1 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
5 | P17225 (/IDA) Q00438 (/IDA) Q66H20 (/IDA) Q66H20 (/IDA) Q80XZ1 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
3 | P17225 (/ISO) Q91Z31 (/ISO) Q91Z31 (/ISO) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
3 | P26599 (/TAS) P26599 (/TAS) P26599 (/TAS) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
3 | P26599 (/TAS) P26599 (/TAS) P26599 (/TAS) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
3 | P26599 (/HDA) P26599 (/HDA) P26599 (/HDA) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
|
3 | P26599 (/HDA) P26599 (/HDA) P26599 (/HDA) |
Showing 1 to 10 of 19 entries