The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Erythroid Transcription Factor GATA-1, subunit A
".
FunFam 55: GATA transcription factor 21
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 3 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
5 | Q5HZ36 (/ISS) Q5HZ36 (/ISS) Q9FJ10 (/ISS) Q9FJ10 (/ISS) Q9FJ10 (/ISS) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
2 | Q5HZ36 (/IPI) Q5HZ36 (/IPI) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
2 | Q5HZ36 (/IDA) Q5HZ36 (/IDA) |
There are 29 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Response to light stimulus GO:0009416
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.
|
6 | Q5HZ36 (/IEP) Q5HZ36 (/IEP) Q6YW48 (/IEP) Q6YW48 (/IEP) Q8LC59 (/IEP) Q8LC59 (/IEP) |
Chloroplast organization GO:0009658
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.
|
4 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) Q6YW48 (/IMP) Q6YW48 (/IMP) |
Response to cytokinin GO:0009735
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
|
4 | Q5HZ36 (/IEP) Q5HZ36 (/IEP) Q6YW48 (/IEP) Q6YW48 (/IEP) |
Response to gibberellin GO:0009739
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
|
4 | Q5HZ36 (/IEP) Q5HZ36 (/IEP) Q6YW48 (/IEP) Q6YW48 (/IEP) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Circadian rhythm GO:0007623
Any biological process in an organism that recurs with a regularity of approximately 24 hours.
|
2 | Q5HZ36 (/IEP) Q5HZ36 (/IEP) |
Response to absence of light GO:0009646
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an absence of light stimuli.
|
2 | Q6YW48 (/IEP) Q6YW48 (/IEP) |
Response to auxin GO:0009733
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
|
2 | Q5HZ36 (/IEP) Q5HZ36 (/IEP) |
Cytokinin-activated signaling pathway GO:0009736
A series of molecular signals generated by the binding of a cytokinin to a receptor, and ending with regulation of a downstream cellular process, e.g. transcription.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Gibberellic acid mediated signaling pathway GO:0009740
A series of molecular signals mediated by the detection of gibberellic acid.
|
2 | Q5HZ36 (/IEP) Q5HZ36 (/IEP) |
Regulation of flower development GO:0009909
Any process that modulates the frequency, rate or extent of flower development.
|
2 | Q6YW48 (/IMP) Q6YW48 (/IMP) |
Negative regulation of flower development GO:0009910
Any process that stops, prevents, or reduces the frequency, rate or extent of flower development.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Negative regulation of gibberellic acid mediated signaling pathway GO:0009938
Any process that stops, prevents, or reduces the frequency, rate or extent of gibberellic acid mediated signaling activity.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Regulation of seed germination GO:0010029
Any process that modulates the frequency, rate or extent of seed germination.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Chloroplast elongation GO:0010151
Expansion of the chloroplast that usually precedes division.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Negative regulation of seed germination GO:0010187
Any process that stops, prevents, or reduces the frequency, rate or extent of seed germination.
|
2 | Q5HZ36 (/IEP) Q5HZ36 (/IEP) |
Glucose mediated signaling pathway GO:0010255
The process in which a change in the level of mono- and disaccharide glucose trigger the expression of genes controlling metabolic and developmental processes.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Regulation of chlorophyll biosynthetic process GO:0010380
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Regulation of gene expression GO:0010468
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
2 | Q5HZ36 (/IDA) Q5HZ36 (/IDA) |
Regulation of carbohydrate utilization GO:0043610
Any process that modulates the frequency, rate or extent of carbohydrate utilization.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Lateral root development GO:0048527
The process whose specific outcome is the progression of the lateral root over time, from its formation to the mature structure. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.
|
2 | Q8LC59 (/IMP) Q8LC59 (/IMP) |
Regulation of nitrogen compound metabolic process GO:0051171
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nitrogen or nitrogenous compounds.
|
2 | Q5HZ36 (/IEP) Q5HZ36 (/IEP) |
Regulation of nitrogen compound metabolic process GO:0051171
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nitrogen or nitrogenous compounds.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Regulation of seed development GO:0080050
Any process that modulates the frequency, rate or extent of seed development.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Plant organ senescence GO:0090693
The process that occurs in a plant organ near the end of its active life that is associated with the dismantling of cell components and membranes, and an overall decline in metabolism.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Plant organ development GO:0099402
Development of a plant organ, a multi-tissue plant structure that forms a functional unit.
|
2 | Q6YW48 (/IMP) Q6YW48 (/IMP) |
Response to nitrogen compound GO:1901698
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus.
|
2 | Q6YW48 (/IEP) Q6YW48 (/IEP) |
Positive regulation of chlorophyll biosynthetic process GO:1902326
Any process that activates or increases the frequency, rate or extent of chlorophyll biosynthetic process.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
Regulation of photoperiodism, flowering GO:2000028
Any process that modulates the frequency, rate or extent of photoperiodism, flowering.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | Q5HZ36 (/IMP) Q5HZ36 (/IMP) |