The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 2: Trafficking protein particle complex subunit 4

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 1 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
9 Q9ES56 (/IPI) Q9ES56 (/IPI) Q9Y296 (/IPI) Q9Y296 (/IPI) Q9Y296 (/IPI) Q9Y296 (/IPI) Q9Y296 (/IPI) Q9Y296 (/IPI) Q9Y296 (/IPI)

There are 5 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Dendrite development GO:0016358
The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.
7 Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS)
COPII vesicle coating GO:0048208
The addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.
7 Q9Y296 (/TAS) Q9Y296 (/TAS) Q9Y296 (/TAS) Q9Y296 (/TAS) Q9Y296 (/TAS) Q9Y296 (/TAS) Q9Y296 (/TAS)
Vesicle-mediated transport GO:0016192
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
2 Q9ES56 (/TAS) Q9ES56 (/TAS)
Dendrite development GO:0016358
The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.
2 Q9ES56 (/IDA) Q9ES56 (/IDA)
Neurotransmitter receptor biosynthetic process GO:0045212
The chemical reactions and pathways resulting in the formation of neurotransmitter receptors.
2 Q9ES56 (/TAS) Q9ES56 (/TAS)

There are 12 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
TRAPP complex GO:0030008
A large complex that acts as a tethering factor involved in transporting vesicles from the ER through the Golgi to the plasma membrane. A TRAPP (transport protein particle) complex has a core set of proteins which are joined by specific subunits depending on the cellular component where a given TRAPP complex is active.
9 Q9ES56 (/IDA) Q9ES56 (/IDA) Q9Y296 (/IDA) Q9Y296 (/IDA) Q9Y296 (/IDA) Q9Y296 (/IDA) Q9Y296 (/IDA) Q9Y296 (/IDA) Q9Y296 (/IDA)
Golgi stack GO:0005795
The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.
7 Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
7 Q9Y296 (/TAS) Q9Y296 (/TAS) Q9Y296 (/TAS) Q9Y296 (/TAS) Q9Y296 (/TAS) Q9Y296 (/TAS) Q9Y296 (/TAS)
Synaptic vesicle GO:0008021
A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.
7 Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS)
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
7 Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS)
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
7 Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS) Q9Y296 (/ISS)
Golgi stack GO:0005795
The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.
2 Q9ES56 (/IDA) Q9ES56 (/IDA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
2 Q9ES56 (/TAS) Q9ES56 (/TAS)
Synaptic vesicle GO:0008021
A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.
2 Q9ES56 (/IDA) Q9ES56 (/IDA)
TRAPP complex GO:0030008
A large complex that acts as a tethering factor involved in transporting vesicles from the ER through the Golgi to the plasma membrane. A TRAPP (transport protein particle) complex has a core set of proteins which are joined by specific subunits depending on the cellular component where a given TRAPP complex is active.
2 Q9ES56 (/ISO) Q9ES56 (/ISO)
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
2 Q9ES56 (/IDA) Q9ES56 (/IDA)
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
2 Q9ES56 (/IDA) Q9ES56 (/IDA)
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