The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
Longin domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 20: Synaptobrevin homolog YKT6

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 4 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
SNAP receptor activity GO:0005484
Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion.
10 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
10 P36015 (/IPI) P36015 (/IPI) P36015 (/IPI) P36015 (/IPI) P36015 (/IPI) P36015 (/IPI) P36015 (/IPI) P36015 (/IPI) P36015 (/IPI) P36015 (/IPI)
Palmitoyltransferase activity GO:0016409
Catalysis of the transfer of a palmitoyl (CH3-
10 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
SNAP receptor activity GO:0005484
Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion.
1 O60073 (/ISO)

There are 9 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
10 P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP)
Intra-Golgi vesicle-mediated transport GO:0006891
The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).
10 P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP)
Vesicle fusion GO:0006906
Fusion of the membrane of a transport vesicle with its target membrane.
10 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
Vacuole fusion, non-autophagic GO:0042144
The fusion of two vacuole membranes to form a single vacuole.
10 P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP) P36015 (/IMP)
Vacuole inheritance GO:0000011
The distribution of vacuoles into daughter cells after mitosis or meiosis, mediated by interactions between vacuoles and the cytoskeleton.
3 Q5AI79 (/IMP) Q5AI79 (/IMP) Q5AI79 (/IMP)
Filamentous growth GO:0030447
The process in which a multicellular organism, a unicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.
3 Q5AI79 (/IMP) Q5AI79 (/IMP) Q5AI79 (/IMP)
Filamentous growth of a population of unicellular organisms in response to biotic stimulus GO:0036180
The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a biotic (living) stimulus.
3 Q5AI79 (/IMP) Q5AI79 (/IMP) Q5AI79 (/IMP)
Intracellular protein transport GO:0006886
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
1 O60073 (/NAS)
Vesicle-mediated transport GO:0016192
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
1 O60073 (/ISO)

There are 7 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Fungal-type vacuole GO:0000324
A vacuole that has both lytic and storage functions. The fungal vacuole is a large, membrane-bounded organelle that functions as a reservoir for the storage of small molecules (including polyphosphate, amino acids, several divalent cations (e.g. calcium), other ions, and other small molecules) as well as being the primary compartment for degradation. It is an acidic compartment, containing an ensemble of acid hydrolases. At least in S. cerevisiae, there are indications that the morphology of the vacuole is variable and correlated with the cell cycle, with logarithmically growing cells having a multilobed, reticulated vacuole, while stationary phase cells contain a single large structure.
10 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
10 P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA)
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
10 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
10 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
10 P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA) P36015 (/HDA)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
10 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
SNARE complex GO:0031201
A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25.
10 P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA) P36015 (/IDA)
CATH-Gene3D is a Global Biodata Core Resource Learn more...