The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Zinc/RING finger domain, C3HC4 (zinc finger)
".
FunFam 273: E3 ubiquitin-protein ligase RBX1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
|
16 |
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
(6 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
8 | Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) |
Protein binding, bridging GO:0030674
The binding activity of a molecule that brings together two or more protein molecules, or a protein and another macromolecule or complex, through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way.
|
8 | Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) |
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
1 | Q9NHX0 (/ISM) |
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
|
1 | Q9NHX0 (/IDA) |
Cullin family protein binding GO:0097602
Interacting selectively and non-covalently with any member of the cullin family, hydrophobic proteins that act as scaffolds for ubiquitin ligases (E3).
|
1 | Q9NHX0 (/IPI) |
There are 10 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
16 |
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
(6 more) |
G1/S transition of mitotic cell cycle GO:0000082
The mitotic cell cycle transition by which a cell in G1 commits to S phase. The process begins with the build up of G1 cyclin-dependent kinase (G1 CDK), resulting in the activation of transcription of G1 cyclins. The process ends with the positive feedback of the G1 cyclins on the G1 CDK which commits the cell to S phase, in which DNA replication is initiated.
|
8 | Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) |
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
8 | Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) |
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
8 | Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) Q08273 (/IMP) |
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0031146
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.
|
8 | Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) |
Activation of cysteine-type endopeptidase activity involved in apoptotic process GO:0006919
Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process.
|
1 | Q9NHX0 (/IGI) |
Cell population proliferation GO:0008283
The multiplication or reproduction of cells, resulting in the expansion of a cell population.
|
1 | Q9NHX0 (/ISS) |
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
|
1 | Q9NHX0 (/IDA) |
Lipid storage GO:0019915
The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.
|
1 | Q9NHX0 (/IDA) |
Flagellated sperm motility GO:0030317
Any process involved in the controlled movement of a flagellated sperm cell.
|
1 | Q9NHX0 (/IMP) |
There are 11 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Ubiquitin ligase complex GO:0000151
A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.
|
16 |
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
O77367 (/ISS)
(6 more) |
Apicoplast GO:0020011
The plastid organelle found in apicomplexans.
|
16 |
O77367 (/RCA)
O77367 (/RCA)
O77367 (/RCA)
O77367 (/RCA)
O77367 (/RCA)
O77367 (/RCA)
O77367 (/RCA)
O77367 (/RCA)
O77367 (/RCA)
O77367 (/RCA)
(6 more) |
Cul3-RING ubiquitin ligase complex GO:0031463
A ubiquitin ligase complex in which a cullin from the Cul3 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a BTB-domain-containing protein.
|
9 | Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q9NHX0 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
8 | Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
8 | Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) |
SCF ubiquitin ligase complex GO:0019005
A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).
|
8 | Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) |
SCF ubiquitin ligase complex GO:0019005
A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).
|
8 | Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) Q08273 (/IPI) |
Cul8-RING ubiquitin ligase complex GO:0035361
A ubiquitin ligase complex in which a cullin from the Cul8 subfamily and a RING domain protein form the catalytic core. In S. cerevisiae, Mms1p acts as the adaptor protein and substrate specificity is conferred by any of a number of different proteins.
|
8 | Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) Q08273 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q9NHX0 (/ISS) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
1 | Q9NHX0 (/TAS) |
SCF ubiquitin ligase complex GO:0019005
A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).
|
1 | Q9NHX0 (/ISS) |