CATH Superfamily 3.30.160.20
The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 1: 30S ribosomal protein S5
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 3 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
636 |
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
(626 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
318 |
P0A7W1 (/IPI)
P0A7W1 (/IPI)
P0A7W1 (/IPI)
P0A7W1 (/IPI)
P0A7W1 (/IPI)
P0A7W1 (/IPI)
P0A7W1 (/IPI)
P0A7W1 (/IPI)
P0A7W1 (/IPI)
P0A7W1 (/IPI)
(308 more) |
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
14 |
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
(4 more) |
There are 11 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Ribosomal small subunit assembly GO:0000028
The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the small ribosomal subunit.
|
636 |
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
(626 more) |
Maintenance of translational fidelity GO:1990145
Suppression of the occurrence of translational errors, such as codon-anticodon mis-paring, during the process of translation of a protein using an mRNA template.
|
318 |
P0A7W1 (/IMP)
P0A7W1 (/IMP)
P0A7W1 (/IMP)
P0A7W1 (/IMP)
P0A7W1 (/IMP)
P0A7W1 (/IMP)
P0A7W1 (/IMP)
P0A7W1 (/IMP)
P0A7W1 (/IMP)
P0A7W1 (/IMP)
(308 more) |
Regulation of translational fidelity GO:0006450
Any process that modulates the ability of the translational apparatus to interpret the genetic code.
|
16 |
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
(6 more) |
Ribosome biogenesis GO:0042254
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
|
16 |
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
Q5HSA7 (/ISS)
(6 more) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
14 |
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
(4 more) |
Response to cold GO:0009409
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
|
1 | P93014 (/IEP) |
Response to cold GO:0009409
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
|
1 | P93014 (/IMP) |
Adaxial/abaxial pattern specification GO:0009955
The regionalization process in which differences in cell differentiation along the adaxial/abaxial are generated. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.
|
1 | P93014 (/IGI) |
Plastid translation GO:0032544
The chemical reactions and pathways resulting in the formation of a protein in a plastid. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the plastid has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code.
|
1 | P93014 (/IMP) |
Response to cadmium ion GO:0046686
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
|
1 | P93014 (/IEP) |
Chloroplast rRNA processing GO:1901259
Any rRNA processing that takes place in chloroplast.
|
1 | P93014 (/IMP) |
There are 12 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
|
636 |
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
C3SR27 (/IDA)
(626 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
318 |
P0A7W1 (/IDA)
P0A7W1 (/IDA)
P0A7W1 (/IDA)
P0A7W1 (/IDA)
P0A7W1 (/IDA)
P0A7W1 (/IDA)
P0A7W1 (/IDA)
P0A7W1 (/IDA)
P0A7W1 (/IDA)
P0A7W1 (/IDA)
(308 more) |
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
|
14 |
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
Q9KP01 (/ISS)
(4 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
13 |
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
(3 more) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
13 |
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
P9WH33 (/HDA)
(3 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | P93014 (/IDA) |
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
|
1 | P93014 (/IDA) |
Chloroplast thylakoid GO:0009534
Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana.
|
1 | P93014 (/IDA) |
Chloroplast thylakoid membrane GO:0009535
The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
|
1 | P93014 (/IDA) |
Chloroplast stroma GO:0009570
The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.
|
1 | P93014 (/IDA) |
Thylakoid GO:0009579
A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.
|
1 | P93014 (/IDA) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
1 | P93014 (/IDA) |