The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 2: NHP2-like protein 1 homolog
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 17 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
There are 19 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
201 |
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
(191 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
48 |
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
(38 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
48 |
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
(38 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
48 |
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
(38 more) |
Box C/D snoRNP assembly GO:0000492
The aggregation, arrangement and bonding together of proteins and a box C/D snoRNA to form a box C/D small nucleolar ribonucleoprotein (snoRNP) complex.
|
48 |
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
(38 more) |
RRNA processing GO:0006364
Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
|
48 |
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
P55769 (/TAS)
(38 more) |
Single fertilization GO:0007338
The union of male and female gametes to form a zygote.
|
48 |
Q9D0T1 (/IDA)
Q9D0T1 (/IDA)
Q9D0T1 (/IDA)
Q9D0T1 (/IDA)
Q9D0T1 (/IDA)
Q9D0T1 (/IDA)
Q9D0T1 (/IDA)
Q9D0T1 (/IDA)
Q9D0T1 (/IDA)
Q9D0T1 (/IDA)
(38 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
10 | P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) |
RRNA 2'-O-methylation GO:0000451
The addition of a methyl group to the 2'-oxygen atom of a nucleotide residue in an rRNA molecule during ribosome biogenesis.
|
10 | P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) |
Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000462
Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
|
10 | P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) P39990 (/IMP) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
10 | Q38F38 (/ISM) Q38F38 (/ISM) Q38F38 (/ISM) Q38F38 (/ISM) Q38F38 (/ISM) Q9GTN8 (/ISM) Q9GTN8 (/ISM) Q9GTN8 (/ISM) Q9GTN8 (/ISM) Q9GTN8 (/ISM) |
RRNA methylation GO:0031167
The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule.
|
10 | P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) P39990 (/TAS) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
6 | Q9U3Z7 (/IC) Q9U3Z7 (/IC) Q9U3Z7 (/IC) Q9U3Z7 (/IC) Q9U3Z7 (/IC) Q9U3Z7 (/IC) |
Posttranscriptional regulation of gene expression GO:0010608
Any process that modulates the frequency, rate or extent of gene expression after the production of an RNA transcript.
|
6 | Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) |
Positive regulation of translation GO:0045727
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
|
6 | Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) |
Muscle tissue morphogenesis GO:0060415
The process in which the anatomical structures of muscle tissue are generated and organized. Muscle tissue consists of a set of cells that are part of an organ and carry out a contractive function.
|
6 | Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) Q9U3Z7 (/IMP) |
Maturation of SSU-rRNA GO:0030490
Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule.
|
1 | O74690 (/ISO) |
MRNA cis splicing, via spliceosome GO:0045292
The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.
|
1 | O74690 (/ISO) |
Somite development GO:0061053
The progression of a somite from its initial formation to the mature structure. Somites are mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.
|
1 | Q7ZV23 (/IMP) |
There are 31 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
195 |
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
(185 more) |
U4atac snRNP GO:0005690
A ribonucleoprotein complex that contains small nuclear RNA U4atac.
|
195 |
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
(185 more) |
U4/U6 x U5 tri-snRNP complex GO:0046540
A ribonucleoprotein complex formed by the association of the U4/U6 and U5 small nuclear ribonucleoproteins.
|
195 |
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
(185 more) |
U2-type precatalytic spliceosome GO:0071005
A spliceosomal complex that is formed by the recruitment of the preassembled U4/U6.U5 tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U1, U2 and U4/U6.U5 snRNPs.
|
195 |
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
P55770 (/ISS)
(185 more) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
72 |
F4K455 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
(62 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
69 |
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
(59 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
58 |
P39990 (/TAS)
P39990 (/TAS)
P39990 (/TAS)
P39990 (/TAS)
P39990 (/TAS)
P39990 (/TAS)
P39990 (/TAS)
P39990 (/TAS)
P39990 (/TAS)
P39990 (/TAS)
(48 more) |
Box C/D snoRNP complex GO:0031428
A ribonucleoprotein complex containing small nucleolar RNA of the box C/D type that can carry out ribose-2'-O-methylation of target RNAs.
|
58 |
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
(48 more) |
U4/U6 x U5 tri-snRNP complex GO:0046540
A ribonucleoprotein complex formed by the association of the U4/U6 and U5 small nuclear ribonucleoproteins.
|
58 |
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
P39990 (/IDA)
(48 more) |
U4/U6 x U5 tri-snRNP complex GO:0046540
A ribonucleoprotein complex formed by the association of the U4/U6 and U5 small nuclear ribonucleoproteins.
|
49 |
O74690 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
(39 more) |
Dense fibrillar component GO:0001651
A structure found in the nucleolus, which contains newly synthesized preribosomal RNA (pre-rRNA) and a collection of proteins.
|
48 |
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
(38 more) |
Dense fibrillar component GO:0001651
A structure found in the nucleolus, which contains newly synthesized preribosomal RNA (pre-rRNA) and a collection of proteins.
|
48 |
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
(38 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
48 |
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
(38 more) |
U4atac snRNP GO:0005690
A ribonucleoprotein complex that contains small nuclear RNA U4atac.
|
48 |
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
(38 more) |
U4atac snRNP GO:0005690
A ribonucleoprotein complex that contains small nuclear RNA U4atac.
|
48 |
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
(38 more) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
48 |
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
(38 more) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
48 |
Q9D0T1 (/ISS)
Q9D0T1 (/ISS)
Q9D0T1 (/ISS)
Q9D0T1 (/ISS)
Q9D0T1 (/ISS)
Q9D0T1 (/ISS)
Q9D0T1 (/ISS)
Q9D0T1 (/ISS)
Q9D0T1 (/ISS)
Q9D0T1 (/ISS)
(38 more) |
Box C/D snoRNP complex GO:0031428
A ribonucleoprotein complex containing small nucleolar RNA of the box C/D type that can carry out ribose-2'-O-methylation of target RNAs.
|
48 |
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
Q9D0T1 (/IMP)
(38 more) |
Box C/D snoRNP complex GO:0031428
A ribonucleoprotein complex containing small nucleolar RNA of the box C/D type that can carry out ribose-2'-O-methylation of target RNAs.
|
48 |
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
(38 more) |
Box C/D snoRNP complex GO:0031428
A ribonucleoprotein complex containing small nucleolar RNA of the box C/D type that can carry out ribose-2'-O-methylation of target RNAs.
|
48 |
P55769 (/NAS)
P55769 (/NAS)
P55769 (/NAS)
P55769 (/NAS)
P55769 (/NAS)
P55769 (/NAS)
P55769 (/NAS)
P55769 (/NAS)
P55769 (/NAS)
P55769 (/NAS)
(38 more) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
48 |
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
(38 more) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
48 |
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
(38 more) |
U2-type precatalytic spliceosome GO:0071005
A spliceosomal complex that is formed by the recruitment of the preassembled U4/U6.U5 tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U1, U2 and U4/U6.U5 snRNPs.
|
48 |
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
P55769 (/IDA)
(38 more) |
U2-type precatalytic spliceosome GO:0071005
A spliceosomal complex that is formed by the recruitment of the preassembled U4/U6.U5 tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the U1, U2 and U4/U6.U5 snRNPs.
|
48 |
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
Q9D0T1 (/ISO)
(38 more) |
Ribosome GO:0005840
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
|
10 | Q38F38 (/ISM) Q38F38 (/ISM) Q38F38 (/ISM) Q38F38 (/ISM) Q38F38 (/ISM) Q9GTN8 (/ISM) Q9GTN8 (/ISM) Q9GTN8 (/ISM) Q9GTN8 (/ISM) Q9GTN8 (/ISM) |
Small-subunit processome GO:0032040
A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.
|
10 | P39990 (/IDA) P39990 (/IDA) P39990 (/IDA) P39990 (/IDA) P39990 (/IDA) P39990 (/IDA) P39990 (/IDA) P39990 (/IDA) P39990 (/IDA) P39990 (/IDA) |
Small nuclear ribonucleoprotein complex GO:0030532
A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs.
|
6 | Q9U3Z7 (/ISS) Q9U3Z7 (/ISS) Q9U3Z7 (/ISS) Q9U3Z7 (/ISS) Q9U3Z7 (/ISS) Q9U3Z7 (/ISS) |
Precatalytic spliceosome GO:0071011
A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs.
|
6 | Q9U3Z7 (/HDA) Q9U3Z7 (/HDA) Q9U3Z7 (/HDA) Q9U3Z7 (/HDA) Q9U3Z7 (/HDA) Q9U3Z7 (/HDA) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
1 | O74690 (/HDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | F4JRD3 (/IDA) |
Small-subunit processome GO:0032040
A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.
|
1 | O74690 (/ISO) |