The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Malate synthase, domain 3
".
FunFam 1: Malate synthase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Malate synthase activity GO:0004474
Catalysis of the reaction: acetyl-CoA + glyoxylate + H(2)O = (S)-malate + CoA + H(+).
|
15 |
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
(5 more) |
Malate synthase activity GO:0004474
Catalysis of the reaction: acetyl-CoA + glyoxylate + H(2)O = (S)-malate + CoA + H(+).
|
8 | P21826 (/IMP) P21826 (/IMP) P21826 (/IMP) P28344 (/IMP) P30952 (/IMP) P30952 (/IMP) Q9LZC3 (/IMP) Q9LZC3 (/IMP) |
Malate synthase activity GO:0004474
Catalysis of the reaction: acetyl-CoA + glyoxylate + H(2)O = (S)-malate + CoA + H(+).
|
5 | Q10663 (/ISS) Q9KTZ6 (/ISS) Q9KTZ6 (/ISS) Q9KTZ6 (/ISS) Q9KTZ6 (/ISS) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
3 | C5MBE7 (/IPI) P30952 (/IPI) P30952 (/IPI) |
Isocitrate lyase activity GO:0004451
Catalysis of the reaction: isocitrate = glyoxylate + succinate.
|
1 | Q10663 (/ISS) |
Citramalate lyase activity GO:0047776
Catalysis of the reaction: S-citramalate = acetate + pyruvate.
|
1 | P28344 (/RCA) |
There are 10 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Glyoxylate cycle GO:0006097
A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate.
|
12 |
P08997 (/IC)
P08997 (/IC)
P08997 (/IC)
P08997 (/IC)
P08997 (/IC)
P08997 (/IC)
P08997 (/IC)
P08997 (/IC)
P08997 (/IC)
P08997 (/IC)
(2 more) |
Tricarboxylic acid cycle GO:0006099
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
|
4 | Q9KTZ6 (/ISS) Q9KTZ6 (/ISS) Q9KTZ6 (/ISS) Q9KTZ6 (/ISS) |
Allantoin catabolic process GO:0000256
The chemical reactions and pathways resulting in the breakdown of allantoin, (2,5-dioxo-4-imidazolidinyl)urea.
|
3 | P21826 (/IDA) P21826 (/IDA) P21826 (/IDA) |
Glyoxylate cycle GO:0006097
A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate.
|
3 | P28344 (/IMP) P30952 (/IMP) P30952 (/IMP) |
Glyoxylate cycle GO:0006097
A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate.
|
1 | Q10663 (/ISS) |
Glyoxylate cycle GO:0006097
A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate.
|
1 | P28344 (/RCA) |
Determination of adult lifespan GO:0008340
The control of viability and duration in the adult phase of the life-cycle.
|
1 | Q10663 (/IGI) |
Fatty acid catabolic process GO:0009062
The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
|
1 | P28344 (/IMP) |
Carbon utilization GO:0015976
A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary carbon sources and then activates genes to scavenge the last traces of the primary carbon source and to transport and metabolize alternative carbon sources such as carbon dioxide or carbonic acid. The utilization process begins when the cell or organism detects carbon levels, includes the activation of genes whose products detect, transport or metabolize carbon-containing substances, and ends when carbon is incorporated into the cell or organism's metabolism.
|
1 | P28344 (/IMP) |
Acetate catabolic process GO:0045733
The chemical reactions and pathways resulting in the breakdown of acetate, the anion of acetic acid.
|
1 | P28344 (/IMP) |
There are 7 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
12 |
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
P08997 (/IDA)
(2 more) |
Peroxisome GO:0005777
A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.
|
9 | P21826 (/IDA) P21826 (/IDA) P21826 (/IDA) P28344 (/IDA) P30952 (/IDA) P30952 (/IDA) Q5APD2 (/IDA) Q5APD2 (/IDA) Q5APD2 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
5 | P21826 (/HDA) P21826 (/HDA) P21826 (/HDA) P30952 (/HDA) P30952 (/HDA) |
Peroxisomal matrix GO:0005782
The volume contained within the membranes of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase.
|
3 | P28344 (/IDA) P30952 (/IDA) P30952 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
2 | P30952 (/HDA) P30952 (/HDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
2 | P30952 (/IDA) P30952 (/IDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
1 | Q10663 (/HDA) |