The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
RNA-binding S4 domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
SC:140S ribosomal protein S4Heat shock protein 1540S ribosomal protein S440S ribosomal protein S4, X isoformSC:2Pseudouridine synthaseTyrosine--tRNA ligasePseudouridine synthaseTyrosine--tRNA ligaseRibosome-associated protein YbcJTyrosine--tRNA ligase30S ribosomal protein S4, chloroplasticSC:3Pseudouridine synthase30S ribosomal protein S440s ribosomal protein s940S ribosomal protein S9U3 small nucleolar ribonucleoprotein IMP3Pseudouridine synthasePseudouridine synthasePseudouridine synthaseTyrosine--tRNA ligase40S ribosomal protein S9Ribosomal protein S440S ribosomal protein S9Tyrosine--tRNA ligase40S ribosomal protein S9RNA pseudouridine synthase 2 chloroplastic30S ribosomal subunit S430S ribosomal protein S4Tyrosine--tRNA ligasePseudouridine synthasePseudouridine synthase, putativeRNA pseudouridylate synthaseTyrosine--tRNA ligaseTyrosine--tRNA ligasePseudouridine synthaseRNA-binding protein S4Ribosomal small subunit pseudouridylate synthasePseudouridine synthaseBnaA05g14690D proteinChromosome 15, whole genome shotgun sequencePseudouridine synthasePseudouridine synthaseTyrosine--tRNA ligasePseudouridine synthaseTyrosine--tRNA ligase30S ribosomal protein S4ePseudouridine synthaseRNA pseudouridine synthaseTyrosine--tRNA ligaseTyrosine--tRNA ligasePseudouridine synthaseTyrosine--tRNA ligaseS4 domain containing proteinUncharacterized RNA pseudouridine synthase jhp_0682Tyrosine--tRNA ligaseTyrosine--tRNA ligaseHemolysin (Tly)Pseudouridine synthasePseudouridine synthase30S ribosomal protein S4ePseudouridine synthaseTyrosine--tRNA ligaseTyrosine--tRNA ligaseRibosomal protein S9Uncharacterized proteinPseudouridine synthasePseudouridine synthasePseudouridine synthase40S ribosomal protein S4-330S ribosomal protein S4, chloroplasticcDNA clone:002-120-H01, full insert sequenceUncharacterized protein30S ribosomal protein S4Uncharacterized protein30S ribosomal protein S4Pseudouridine synthaseRibosomal large subunit pseudouridine synthase DPseudouridine synthaseUncharacterized RNA pseudouridine synthase Caur_0901Uncharacterized RNA pseudouridine synthase slr1629tRNA pseudouridine synthase A30S ribosomal protein S4Probable tyrosine--tRNA ligase, mitochondrialTyrosine--tRNA ligaseTyrosine--tRNA ligaseTyrosine--tRNA ligaseTyrosine--tRNA ligasePutative 40S ribosomal protein S440S ribosomal protein S430S ribosomal protein S4, chloroplasticTyrosine--tRNA ligasePre-mRNA-processing factor 19 homolog 240S ribosomal protein S4-3Pseudouridine synthasePseudouridine synthasePseudouridine synthaseUncharacterized RNA pseudouridine synthase MG209Pseudouridine synthasePseudouridine synthase37S ribosomal protein S4-like, mitochondrialTyrosine--tRNA ligaseTyrosine--tRNA ligaseTyrosine--tRNA ligase, mitochondrialTyrosine--tRNA ligaseTyrosine--tRNA ligasePutative ribosomal protein S4 (RPS4A) family proteinUncharacterized protein
« Back to all FunFams

FunFam 39: Pseudouridine synthase

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 0 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.

There are 0 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.

There are 0 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
CATH-Gene3D is a Global Biodata Core Resource Learn more...