The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
DNA Polymerase III, subunit A, domain 2
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 11: Proliferating cell nuclear antigen

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 3 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
10 P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI)
DNA polymerase processivity factor activity GO:0030337
An enzyme regulator activity that increases the processivity of polymerization by DNA polymerase, by allowing the polymerase to move rapidly along DNA while remaining topologically bound to it.
10 P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
10 P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI)

There are 23 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Mitotic cell cycle GO:0000278
Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent.
10 P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI)
Meiotic mismatch repair GO:0000710
A system for the identification and correction of base-base mismatches, small insertion-deletion loops, and regions of heterology that are present in duplex DNA formed with strands from two recombining molecules. Correction of the mismatch can result in non-Mendelian segregation of alleles following meiosis.
10 P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI)
Meiotic mismatch repair GO:0000710
A system for the identification and correction of base-base mismatches, small insertion-deletion loops, and regions of heterology that are present in duplex DNA formed with strands from two recombining molecules. Correction of the mismatch can result in non-Mendelian segregation of alleles following meiosis.
10 P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP)
Leading strand elongation GO:0006272
The process in which an existing DNA strand is extended continuously in a 5' to 3' direction by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication. Leading strand elongation proceeds in the same direction as the replication fork.
10 P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA)
Lagging strand elongation GO:0006273
The process in which an existing DNA strand is extended in a net 3' to 5' direction by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication. Lagging strand DNA elongation proceeds by discontinuous synthesis of short stretches of DNA, known as Okazaki fragments, from RNA primers; these fragments are then joined by DNA ligase. Although each segment of nascent DNA is synthesized in the 5' to 3' direction, the overall direction of lagging strand synthesis is 3' to 5', mirroring the progress of the replication fork.
10 P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA)
Lagging strand elongation GO:0006273
The process in which an existing DNA strand is extended in a net 3' to 5' direction by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication. Lagging strand DNA elongation proceeds by discontinuous synthesis of short stretches of DNA, known as Okazaki fragments, from RNA primers; these fragments are then joined by DNA ligase. Although each segment of nascent DNA is synthesized in the 5' to 3' direction, the overall direction of lagging strand synthesis is 3' to 5', mirroring the progress of the replication fork.
10 P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI)
Nucleotide-excision repair GO:0006289
A DNA repair process in which a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts).
10 P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP)
Mismatch repair GO:0006298
A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
10 P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI)
Mismatch repair GO:0006298
A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
10 P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP)
Mismatch repair GO:0006298
A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
10 P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI)
Postreplication repair GO:0006301
The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication. Includes pathways that remove replication-blocking lesions in conjunction with DNA replication.
10 P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI)
Postreplication repair GO:0006301
The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication. Includes pathways that remove replication-blocking lesions in conjunction with DNA replication.
10 P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP)
Chromatin silencing at telomere GO:0006348
Repression of transcription of telomeric DNA by altering the structure of chromatin.
10 P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP)
Mitotic sister chromatid cohesion GO:0007064
The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission.
10 P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI)
Mitotic sister chromatid cohesion GO:0007064
The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission.
10 P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI)
Chromatin silencing at silent mating-type cassette GO:0030466
Repression of transcription at silent mating-type loci by alteration of the structure of chromatin.
10 P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI)
Chromatin silencing at silent mating-type cassette GO:0030466
Repression of transcription at silent mating-type loci by alteration of the structure of chromatin.
10 P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP)
Establishment of mitotic sister chromatid cohesion GO:0034087
The process in which the sister chromatids of a replicated chromosome become joined along the entire length of the chromosome during S phase during a mitotic cell cycle.
10 P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI)
Maintenance of DNA trinucleotide repeats GO:0035753
Any process involved in sustaining the fidelity and copy number of DNA trinucleotide repeats. DNA trinucleotide repeats are naturally occurring runs of three base-pairs.
10 P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI)
Maintenance of DNA trinucleotide repeats GO:0035753
Any process involved in sustaining the fidelity and copy number of DNA trinucleotide repeats. DNA trinucleotide repeats are naturally occurring runs of three base-pairs.
10 P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP) P15873 (/IMP)
Error-free translesion synthesis GO:0070987
The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions but does not causes an increase in the endogenous mutation level. For S. cerevisiae, RAD30 encodes DNA polymerase eta, which incorporates two adenines. When incorporated across a thymine-thymine dimer, it does not increase the endogenous mutation level.
10 P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI) P15873 (/IGI)
Positive regulation of exodeoxyribonuclease activity GO:1902394
Any process that activates or increases the frequency, rate or extent of exodeoxyribonuclease activity.
10 P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA)
Positive regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands GO:1903022
Any process that activates or increases the frequency, rate or extent of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands.
10 P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA)

There are 3 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
10 P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA)
Replication fork GO:0005657
The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.
10 P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA) P15873 (/IDA)
PCNA complex GO:0043626
A protein complex composed of three identical PCNA monomers, each comprising two similar domains, which are joined in a head-to-tail arrangement to form a homotrimer. Forms a ring-like structure in solution, with a central hole sufficiently large to accommodate the double helix of DNA. Originally characterized as a DNA sliding clamp for replicative DNA polymerases and as an essential component of the replisome, and has also been shown to be involved in other processes including Okazaki fragment processing, DNA repair, translesion DNA synthesis, DNA methylation, chromatin remodeling and cell cycle regulation.
10 P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI) P15873 (/IPI)
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