The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"q2cbj1_9rhob like domain
".
FunFam 7: Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 13 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Procollagen-lysine 5-dioxygenase activity GO:0008475
Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2.
|
6 | O77588 (/ISS) P24802 (/ISS) Q02809 (/ISS) Q02809 (/ISS) Q5R9N3 (/ISS) Q9R0E2 (/ISS) |
Procollagen-lysine 5-dioxygenase activity GO:0008475
Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2.
|
3 | Q02809 (/IDA) Q02809 (/IDA) Q63321 (/IDA) |
Procollagen-lysine 5-dioxygenase activity GO:0008475
Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2.
|
3 | Q02809 (/IMP) Q02809 (/IMP) Q63321 (/IMP) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
2 | Q02809 (/TAS) Q02809 (/TAS) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
1 | Q9R0E2 (/IPI) |
Ferrous iron binding GO:0008198
Interacting selectively and non-covalently with ferrous iron, Fe(II).
|
1 | Q63321 (/IMP) |
Ferrous iron binding GO:0008198
Interacting selectively and non-covalently with ferrous iron, Fe(II).
|
1 | Q9R0E2 (/ISO) |
Procollagen-lysine 5-dioxygenase activity GO:0008475
Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2.
|
1 | Q9R0E2 (/ISO) |
L-ascorbic acid binding GO:0031418
Interacting selectively and non-covalently with L-ascorbic acid, (2R)-2-
|
1 | Q63321 (/IMP) |
L-ascorbic acid binding GO:0031418
Interacting selectively and non-covalently with L-ascorbic acid, (2R)-2-
|
1 | Q9R0E2 (/ISO) |
Peptide binding GO:0042277
Interacting selectively and non-covalently with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds.
|
1 | Q63321 (/IDA) |
Peptide binding GO:0042277
Interacting selectively and non-covalently with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds.
|
1 | Q63321 (/IMP) |
Peptide binding GO:0042277
Interacting selectively and non-covalently with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds.
|
1 | Q9R0E2 (/ISO) |
There are 16 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Peptidyl-lysine hydroxylation GO:0017185
The hydroxylation of peptidyl-lysine to form peptidyl-hydroxylysine.
|
6 | O77588 (/ISS) P24802 (/ISS) Q02809 (/ISS) Q02809 (/ISS) Q5R9N3 (/ISS) Q9R0E2 (/ISS) |
Response to hypoxia GO:0001666
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
|
3 | Q02809 (/IEP) Q02809 (/IEP) Q63321 (/IEP) |
Peptidyl-lysine hydroxylation GO:0017185
The hydroxylation of peptidyl-lysine to form peptidyl-hydroxylysine.
|
3 | Q02809 (/IDA) Q02809 (/IDA) Q63321 (/IDA) |
Cellular protein modification process GO:0006464
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
|
2 | Q02809 (/NAS) Q02809 (/NAS) |
Epidermis development GO:0008544
The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species.
|
2 | Q02809 (/IMP) Q02809 (/IMP) |
Epidermis development GO:0008544
The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species.
|
2 | Q02809 (/TAS) Q02809 (/TAS) |
Fin development GO:0033333
The process whose specific outcome is the progression of a fin over time, from its formation to the mature structure.
|
2 | A0JMD1 (/IMP) A8WIN7 (/IMP) |
Fin morphogenesis GO:0033334
The process in which the anatomical structures of a fin are generated and organized.
|
2 | A0JMD1 (/IMP) A8WIN7 (/IMP) |
Hydroxylysine biosynthetic process GO:0046947
The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.
|
2 | Q02809 (/IDA) Q02809 (/IDA) |
Hydroxylysine biosynthetic process GO:0046947
The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.
|
2 | Q02809 (/ISS) Q02809 (/ISS) |
Hydroxylysine biosynthetic process GO:0046947
The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.
|
2 | Q02809 (/TAS) Q02809 (/TAS) |
Oxidation-reduction process GO:0055114
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
|
2 | Q02809 (/TAS) Q02809 (/TAS) |
Epidermis development GO:0008544
The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species.
|
1 | Q9R0E2 (/ISO) |
Peptidyl-lysine hydroxylation GO:0017185
The hydroxylation of peptidyl-lysine to form peptidyl-hydroxylysine.
|
1 | Q9R0E2 (/ISO) |
Cellular response to hormone stimulus GO:0032870
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus.
|
1 | Q63321 (/IEP) |
Hydroxylysine biosynthetic process GO:0046947
The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.
|
1 | Q9R0E2 (/ISO) |
There are 4 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Endoplasmic reticulum membrane GO:0005789
The lipid bilayer surrounding the endoplasmic reticulum.
|
2 | Q02809 (/TAS) Q02809 (/TAS) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
|
2 | Q02809 (/HDA) Q02809 (/HDA) |
Collagen-containing extracellular matrix GO:0062023
An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells.
|
1 | Q9R0E2 (/HDA) |
Catalytic complex GO:1902494
A protein complex which is capable of catalytic activity.
|
1 | Q9R0E2 (/IMP) |