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CATH Superfamily 2.40.50.100

RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain

The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
SC:1DNA-binding transcriptional regulator ModEDNA-binding transcriptional regulator ModESC:2Acetyl-CoA carboxylase 1DNA-directed RNA polymerase subunit betaAcetyltransferase component of pyruvate dehydrogenase complexDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexDihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complexDNA-directed RNA polymerase subunit betaDNA-directed RNA polymerase subunit betaMacrolide transporter subunit MacADihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexCarbamoyl-phosphate synthase L chain, ATP binding domain proteinSC:3Acetyltransferase component of pyruvate dehydrogenase complexSC:4DNA-directed RNA polymerase subunit betaExosome complex component RRP4Exosome complex component CSL4Exosome complex component RRP4SC:5Glycine cleavage system H proteinSC:639S ribosomal protein L27, mitochondrialexosome complex component RRP4050S ribosomal protein L27Efflux transporter periplasmic adaptor subunitAcetyl-CoA carboxylase biotin carboxyl carrier protein50S ribosomal protein L27Cytochrome fV-type proton ATPase catalytic subunit AMaltose/maltodextrin import ATP-binding protein MalKSpermidine/putrescine import ATP-binding protein PotAp-hydroxybenzoic acid efflux pump subunit AaeA50S ribosomal protein L27Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexUPF0194 membrane protein YbhG50S ribosomal protein L27Sugar ABC transporter, ATP-binding proteinpropionyl-CoA carboxylase alpha chain, mitochondrialsn-glycerol-3-phosphate import ATP-binding protein UgpCDihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrialSpermidine/putrescine import ATP-binding protein PotAAuxiliary transport protein, membrane fusion protein familyDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexMolybdenum import ATP-binding protein ModC50S ribosomal protein L27HlyD family efflux transporter periplasmic adaptor subunitEfflux transporter periplasmic adaptor subunitDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex50S ribosomal protein L27Multidrug resistance protein MdtNGlycine cleavage system H proteinRNA polymerase II subunit A C-terminal domain phosphataseExosome complex component RRP4Protein AbitramAuxiliary transport protein, membrane fusion protein familyExosome complex component rrp4 protein50S ribosomal protein L27DNA-directed RNA polymerase subunitDNA-directed RNA polymerase subunit betaExosome complex exonuclease RRP40Efflux RND transporter periplasmic adaptor subunitExosome complex component CSL4ABC sugar transporter, ATP-binding subunitBiotin/lipoyl attachment domain-containing proteinApicoplast ribosomal protein L2750S ribosomal protein L27Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexExosome complex component RRP4, putative2-oxoglutarate dehydrogenase E2 subunitGlycine cleavage system H proteinGlycerol-3-phosphate ABC transporter ATP-binding proteinV-type ATP synthase alpha chainPutative maltose ABC transporter, ATP-binding proteinMitochondrial ribosomal protein L27,putativeDihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complexBiotin carboxylase subunit of acetyl CoA carboxylasePutative Exosome complex component RRP40Glycine cleavage system H proteinDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexGlycoside hydrolase family 43Exosome complex component CSL4Spermidine/putrescine ABC transporter, ATP-binding proteinDNA-directed RNA polymerase subunit betaExosome complex component Rrp4DNA-directed RNA polymerase subunit betaAGAP005119-PA50S ribosomal protein L27Molybdenum transport operon repressor MopBEfflux RND transporter periplasmic adaptor subunitABC sugar transporter, ATP-binding proteinSugar ABC transporter ATP-binding proteinSugar ABC transporter ATP-binding protein SugCMolybdenum import ATP-binding protein ModCEXOSome (Multiexonuclease complex) componentDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexsn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpCEfflux transporter, RND family, MFP subunitExosome complex exonuclease RRP4, putativeExosome complex component RRP40Rrp40pV-type ATP synthase alpha chainCarbohydrate ABC transporter ATP-binding protein (CUT1 family)Exosome component 3KGD2p Dihydrolipoyl transsuccinylaseCation efflux system proteinGlycerol-3-phosphate ABC transporter ATP-binding proteinsn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpCCarbamoyl-phosphate synthase L chain, ATP-bindingDNA-directed RNA polymerase subunit beta'DNA-directed RNA polymerase subunit beta'DNA-directed RNA polymerase subunit beta'Putative multidrug resistance proteinOxaloacetate decarboxylase, alpha subunitABC transporter related proteinMembrane fusion protein (MFP) family proteinDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complexEfflux RND transporter periplasmic adaptor subunitsn-glycerol-3-phosphate import ATP-binding protein UgpCMultiple sugar ABC transporter ATP-bindingproteinABC transporter ATP-binding proteinGD24941Molybdenum import ATP-binding protein ModCMolybdenum ABC transporter ATP-binding proteinExosome complex exonuclease RRP4Exosome complex component CSL4Bll2173 proteinEfflux transporter, RND family, MFP subunitPutative periplasmic linker proteinSugar ABC transporter, ATP-binding proteinABC transporter ATP-binding proteinABC transporter related proteinABC transporter ATP-binding proteinPredicted proteinBinding-protein-dependent transport system, ATP-binding componentSodium:proton antiporterEXOSome (Multiexonuclease complex) componentTOBE domain proteinRND family efflux transporter, MFP subunitRND efflux membrane fusion proteinEfflux transporter, RND family, MFP subunitExosome complex exonuclease subunit, putativeABC transporter ATP-binding proteinSugar ABC transporter ATP-binding proteinABC transporter ATP-binding proteinATP-binding subunit of an ABC-type osmolytetransporterABC transporter ATP-binding proteinSugar ABC transporter, ATP-binding proteinsn-glycerol-3-phosphate import ATP-binding protein UgpCSll0180 proteinVacuolar ATP synthase catalytic subunit AAcetyl-CoA carboxylase/pyruvate carboxylase fusion protein, putativeComponent of multidrug efflux systemSugar ABC transporter ATP-binding proteinMultidrug resistance protein VceAEfflux pump, RND family, membrane fusion proteinBll5772 proteinUncharacterized proteinPredicted proteinRibosomal RNA processing protein 4Uncharacterized proteinAT5G38890 proteinExosome complex component CSL4Putative exosomal 3'-5' exoribonuclease complex subunit ski4Uncharacterized proteinUncharacterized proteinEfflux pump, RND family, membrane fusion lipoproteinHAE1 family effllux pump MFP componentCytochrome fPutative exosome complex component rrp40YALI0E33121pExosome complex component Rrp4Sugar ABC transporter ATP-binding proteinABC transporter ATP-binding proteinABC transporter, ATP binding protein (Glucose)ABC-type transport system ATP-binding protein (Probable substrate glycerol-3-phosphate)Uncharacterized proteinUncharacterized proteinRNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1Acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferasePyruvate carboxylaseDdl-3RND efflux system, membrane fusion protein CmeARND efflux system, membrane fusion protein CmeARND family efflux transporter MFP subunitRND family efflux transporter MFP subunitSpermidine/putrescine ABC transporter ATP-bindingABC-type transport system ATP-binding protein (Probable substrate thiamine)Putative ABC transporter ATP-binding subunitProbable cation efflux systemProbable cation efflux system (CzcB-like)Putative RND efflux membrane fusion proteinEfflux pump, RND family, membrane fusion lipoproteinProbable membrane-fusion proteinPutative heavy metal efflux system proteinUncharacterized proteinPredicted proteinPredicted proteinExosome complex component RRP4Uncharacterized proteinUncharacterized proteinUncharacterized proteinUncharacterized proteinUncharacterized proteinExosome complex component csl4Uncharacterized proteinUncharacterized proteinUncharacterized proteinPutative glycine cleavage system H protein, mitochondrialUncharacterized proteinGlr3987 proteinRND superfamily efflux pump MFP componentABC transporter ATP-binding proteinsn-glycerol-3-phosphate import ATP-binding protein UgpCSugar ABC transporter, ATP-binding proteinABC-type iron(III) transport system, ATPase componentCytoplasmic membrane protein for maltose uptakeGlr1290 proteinSugar ABC transportor, ATP-binding proteinIron(III)-transport ATP-binding protein sfuCABC transporter relatedSugar ABC transporter, ATP-binding proteinUncharacterized proteinUncharacterized proteinUncharacterized proteinSulfate/molybdate ABC transporter, ATP-binding proteinGll2840 proteinCytochrome f, chloroplasticPutative ABC transporter ATP-binding protein MG187Sll0180 proteinProtein CBR-LIN-7Uncharacterized proteinATPase H+-transporting V1 subunit AFe(3+) ions import ATP-binding protein FbpC 1Molybdenum import ATP-binding protein ModC
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FunFam 100: Carbohydrate ABC transporter ATP-binding protein (...

Representative CATH Domain Q9L0Q1/220-308

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Sequence alignment 200 sequences

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