The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"L,D-transpeptidase catalytic domain-like
".
FunFam 1: L,D-transpeptidase YbiS
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Transferase activity, transferring amino-acyl groups GO:0016755
Catalysis of the transfer of an amino-acyl group from one compound (donor) to another (acceptor).
|
156 |
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
(146 more) |
|
Cysteine-type carboxypeptidase activity GO:0016807
Catalysis of the hydrolysis of C-terminal peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
|
156 |
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
(146 more) |
|
Peptidoglycan L,D-transpeptidase activity GO:0071972
Catalysis of the reaction: 2 a peptidoglycan dimer (tetrapeptide) + 3 H2O = a peptidoglycan tetramer with L,D cross-links (L-Lys-D-Asn-L-Lys) + di-trans,poly-cis-undecaprenyl diphosphate + 4 D-alanine.
|
156 |
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
(146 more) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
11 |
P39176 (/IPI)
P39176 (/IPI)
P39176 (/IPI)
P39176 (/IPI)
P39176 (/IPI)
P39176 (/IPI)
P39176 (/IPI)
P39176 (/IPI)
P39176 (/IPI)
P39176 (/IPI)
(1 more) |
There are 3 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Gram-negative-bacterium-type cell wall biogenesis GO:0043164
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall of the type found in Gram-negative bacteria. The cell wall is the rigid or semi-rigid envelope lying outside the cell membrane.
|
156 |
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
(146 more) |
|
Peptidoglycan-protein cross-linking GO:0018104
The process of covalently linking peptidoglycan (murein) to proteins.
|
138 |
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
P0AAX8 (/IMP)
(128 more) |
|
Cell wall macromolecule metabolic process GO:0044036
The chemical reactions and pathways involving macromolecules forming, or destined to form, part of the cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.
|
18 |
P76193 (/IMP)
P76193 (/IMP)
P76193 (/IMP)
P76193 (/IMP)
P76193 (/IMP)
P76193 (/IMP)
P76193 (/IMP)
P76193 (/IMP)
P76193 (/IMP)
P76193 (/IMP)
(8 more) |
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Periplasmic space GO:0042597
The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).
|
126 |
P0AAX8 (/IDA)
P0AAX8 (/IDA)
P0AAX8 (/IDA)
P0AAX8 (/IDA)
P0AAX8 (/IDA)
P0AAX8 (/IDA)
P0AAX8 (/IDA)
P0AAX8 (/IDA)
P0AAX8 (/IDA)
P0AAX8 (/IDA)
(116 more) |
