The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Lyase, Ornithine Decarboxylase; Chain A, domain 1
".
FunFam 3: Diaminopimelate decarboxylase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 5 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Diaminopimelate decarboxylase activity GO:0008836
Catalysis of the reaction: meso-2,6-diaminopimelate + H(+) = L-lysine + CO(2).
|
15 |
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
(5 more) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
12 |
P9WIU7 (/IPI)
P9WIU7 (/IPI)
P9WIU7 (/IPI)
P9WIU7 (/IPI)
P9WIU7 (/IPI)
P9WIU7 (/IPI)
P9WIU7 (/IPI)
P9WIU7 (/IPI)
P9WIU7 (/IPI)
P9WIU7 (/IPI)
(2 more) |
|
Diaminopimelate decarboxylase activity GO:0008836
Catalysis of the reaction: meso-2,6-diaminopimelate + H(+) = L-lysine + CO(2).
|
12 |
Q55CY1 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
(2 more) |
|
Pyridoxal phosphate binding GO:0030170
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
|
12 |
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
(2 more) |
|
Diaminopimelate decarboxylase activity GO:0008836
Catalysis of the reaction: meso-2,6-diaminopimelate + H(+) = L-lysine + CO(2).
|
1 | P19572 (/IMP) |
There are 2 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Lysine biosynthetic process via diaminopimelate GO:0009089
The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate.
|
12 |
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
P9WIU7 (/IDA)
(2 more) |
|
Lysine biosynthetic process via diaminopimelate GO:0009089
The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate.
|
11 |
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
Q9KVL7 (/ISS)
(1 more) |
There are 4 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
12 |
P9WIU7 (/HDA)
P9WIU7 (/HDA)
P9WIU7 (/HDA)
P9WIU7 (/HDA)
P9WIU7 (/HDA)
P9WIU7 (/HDA)
P9WIU7 (/HDA)
P9WIU7 (/HDA)
P9WIU7 (/HDA)
P9WIU7 (/HDA)
(2 more) |
|
Chloroplast stroma GO:0009570
The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.
|
3 | Q949X7 (/IDA) Q949X7 (/IDA) Q94A94 (/IDA) |
|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | Q94A94 (/IDA) |
|
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
|
1 | Q94A94 (/IDA) |
