CATH Superfamily 2.40.290.10
The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 11: DNA binding protein
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 3 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Damaged DNA binding GO:0003684
Interacting selectively and non-covalently with damaged DNA.
|
6 | P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
6 | P32807 (/IPI) P32807 (/IPI) P32807 (/IPI) P32807 (/IPI) P32807 (/IPI) P32807 (/IPI) |
Telomerase RNA binding GO:0070034
Interacting selectively and non-covalently with the telomerase RNA template.
|
6 | P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) |
There are 13 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Telomere maintenance GO:0000723
Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins, the length of telomeric DNA and the replication and repair of the DNA. These processes includes those that shorten, lengthen, replicate and repair the telomeric DNA sequences.
|
6 | P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) |
Telomere maintenance GO:0000723
Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins, the length of telomeric DNA and the replication and repair of the DNA. These processes includes those that shorten, lengthen, replicate and repair the telomeric DNA sequences.
|
6 | P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) |
Double-strand break repair via homologous recombination GO:0000724
The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.
|
6 | P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) |
Double-strand break repair via break-induced replication GO:0000727
The error-free repair of a double-strand break in DNA in which the centromere-proximal end of a broken chromosome searches for a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template, and progresses to the end of the chromosome.
|
6 | P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) |
Double-strand break repair via break-induced replication GO:0000727
The error-free repair of a double-strand break in DNA in which the centromere-proximal end of a broken chromosome searches for a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template, and progresses to the end of the chromosome.
|
6 | P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) |
Double-strand break repair via nonhomologous end joining GO:0006303
The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends. This term covers instances of separate pathways, called classical (or canonical) and alternative nonhomologous end joining (C-NHEJ and A-NHEJ). These in turn may further branch into sub-pathways, but evidence is still unclear.
|
6 | P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) |
Chromatin assembly or disassembly GO:0006333
The formation or destruction of chromatin structures.
|
6 | P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) |
Chromatin silencing at telomere GO:0006348
Repression of transcription of telomeric DNA by altering the structure of chromatin.
|
6 | P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) |
Chromatin silencing at silent mating-type cassette GO:0030466
Repression of transcription at silent mating-type loci by alteration of the structure of chromatin.
|
6 | P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) P32807 (/IGI) |
Chromatin silencing at silent mating-type cassette GO:0030466
Repression of transcription at silent mating-type loci by alteration of the structure of chromatin.
|
6 | P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) |
Mitochondrial double-strand break repair via homologous recombination GO:0097552
The repair of a double-strand break in mitochondrial DNA in which the broken DNA molecule is repaired using homologous sequences.
|
6 | P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) |
Establishment of protein-containing complex localization to telomere GO:0097695
The directed movement of a protein-containing macromolecular complex to a specific location in the telomeric region of a chromosome.
|
6 | P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) |
Chromatin silencing at subtelomere GO:0099114
Repression of transcription of subtelomeric DNA by altering the structure of chromatin.
|
6 | P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) P32807 (/IMP) |
There are 4 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
6 | P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) |
Nuclear envelope GO:0005635
The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
|
6 | P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) |
Nuclear telomeric heterochromatin GO:0005724
Heterochromatic regions of the chromosome found at the telomeres of a chromosome in the nucleus.
|
6 | P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) P32807 (/TAS) |
Ku70:Ku80 complex GO:0043564
Heterodimeric protein complex composed of a 70 kDa and a 80 kDa subunit, binds DNA through a channel formed by the heterodimer. Functions in DNA double stranded break repair, chromosome maintenance, transcription regulation, V(D)J recombination, and activation of DNA-PK.
|
6 | P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) P32807 (/IDA) |