The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
Cyclophilin-like
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 17: Peptidyl-prolyl cis-trans isomerase

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 10 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Peptidyl-prolyl cis-trans isomerase activity GO:0003755
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
56 Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS)
(46 more)
Cyclosporin A binding GO:0016018
Interacting selectively and non-covalently with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids.
56 Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS)
(46 more)
Peptidyl-prolyl cis-trans isomerase activity GO:0003755
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
55 O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA)
(45 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
55 O43447 (/IPI) O43447 (/IPI) O43447 (/IPI) O43447 (/IPI) O43447 (/IPI) O43447 (/IPI) O43447 (/IPI) O43447 (/IPI) O43447 (/IPI) O43447 (/IPI)
(45 more)
Cyclosporin A binding GO:0016018
Interacting selectively and non-covalently with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids.
55 O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA)
(45 more)
Cyclosporin A binding GO:0016018
Interacting selectively and non-covalently with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids.
55 O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS)
(45 more)
Ribonucleoprotein complex binding GO:0043021
Interacting selectively and non-covalently with any complex of RNA and protein.
55 O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA)
(45 more)
Peptidyl-prolyl cis-trans isomerase activity GO:0003755
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
1 Q9D868 (/ISO)
Cyclosporin A binding GO:0016018
Interacting selectively and non-covalently with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids.
1 Q9D868 (/ISO)
Ribonucleoprotein complex binding GO:0043021
Interacting selectively and non-covalently with any complex of RNA and protein.
1 Q9D868 (/ISO)

There are 10 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
58 O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC)
(48 more)
Protein peptidyl-prolyl isomerization GO:0000413
The modification of a protein by cis-trans isomerization of a proline residue.
56 Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS) Q0P5D0 (/ISS)
(46 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
55 O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS)
(45 more)
Protein peptidyl-prolyl isomerization GO:0000413
The modification of a protein by cis-trans isomerization of a proline residue.
55 O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA)
(45 more)
Protein folding GO:0006457
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
55 O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS)
(45 more)
Positive regulation of viral genome replication GO:0045070
Any process that activates or increases the frequency, rate or extent of viral genome replication.
55 O43447 (/IMP) O43447 (/IMP) O43447 (/IMP) O43447 (/IMP) O43447 (/IMP) O43447 (/IMP) O43447 (/IMP) O43447 (/IMP) O43447 (/IMP) O43447 (/IMP)
(45 more)
Protein-containing complex assembly GO:0065003
The aggregation, arrangement and bonding together of a set of macromolecules to form a protein-containing complex.
55 O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS)
(45 more)
Angiogenesis GO:0001525
Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
4 B0V156 (/IMP) Q6IQF8 (/IMP) Q6TLD7 (/IMP) Q7ZVQ9 (/IMP)
Protein peptidyl-prolyl isomerization GO:0000413
The modification of a protein by cis-trans isomerization of a proline residue.
1 Q9D868 (/ISO)
Positive regulation of viral genome replication GO:0045070
Any process that activates or increases the frequency, rate or extent of viral genome replication.
1 Q9D868 (/ISO)

There are 11 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
55 O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS) O43447 (/TAS)
(45 more)
Spliceosomal complex GO:0005681
Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.
55 O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC) O43447 (/IC)
(45 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
55 O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA)
(45 more)
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
55 O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA)
(45 more)
U4/U6 x U5 tri-snRNP complex GO:0046540
A ribonucleoprotein complex formed by the association of the U4/U6 and U5 small nuclear ribonucleoproteins.
55 O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA)
(45 more)
U4/U6 snRNP GO:0071001
A ribonucleoprotein complex that contains base-paired U4 and U6 small nuclear RNAs.
55 O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA) O43447 (/IDA)
(45 more)
Precatalytic spliceosome GO:0071011
A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs.
3 Q4V5H1 (/HDA) Q4V5H1 (/HDA) Q4V5H1 (/HDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 Q9D868 (/ISO)
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
1 Q9D868 (/ISO)
U4/U6 x U5 tri-snRNP complex GO:0046540
A ribonucleoprotein complex formed by the association of the U4/U6 and U5 small nuclear ribonucleoproteins.
1 Q9D868 (/ISO)
U4/U6 snRNP GO:0071001
A ribonucleoprotein complex that contains base-paired U4 and U6 small nuclear RNAs.
1 Q9D868 (/ISO)
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