The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"PUA domain
".
FunFam 1: H/ACA ribonucleoprotein complex subunit CBF5
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 24 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
6 | O60832 (/IPI) O60832 (/IPI) O60832 (/IPI) P33322 (/IPI) P40615 (/IPI) Q9ESX5 (/IPI) |
Pseudouridine synthase activity GO:0009982
Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.
|
6 | P40615 (/ISS) Q5ZJH9 (/ISS) Q9ESX5 (/ISS) Q9LD90 (/ISS) Q9LD90 (/ISS) Q9LD90 (/ISS) |
Pseudouridine synthase activity GO:0009982
Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.
|
4 | O60832 (/IMP) O60832 (/IMP) O60832 (/IMP) P33322 (/IMP) |
Telomerase activity GO:0003720
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes extension of the 3'- end of a DNA strand by one deoxynucleotide at a time using an internal RNA template that encodes the telomeric repeat sequence.
|
3 | O60832 (/IDA) O60832 (/IDA) O60832 (/IDA) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
3 | O60832 (/HDA) O60832 (/HDA) O60832 (/HDA) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
3 | O60832 (/IPI) O60832 (/IPI) O60832 (/IPI) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
3 | O60832 (/TAS) O60832 (/TAS) O60832 (/TAS) |
Pseudouridine synthase activity GO:0009982
Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.
|
3 | Q9LD90 (/TAS) Q9LD90 (/TAS) Q9LD90 (/TAS) |
Box H/ACA snoRNA binding GO:0034513
Interacting selectively and non-covalently with box H/ACA small nucleolar RNA.
|
3 | O60832 (/IPI) O60832 (/IPI) O60832 (/IPI) |
Telomerase RNA binding GO:0070034
Interacting selectively and non-covalently with the telomerase RNA template.
|
3 | O60832 (/IC) O60832 (/IC) O60832 (/IC) |
Showing 1 to 10 of 24 entries
There are 52 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
RRNA processing GO:0006364
Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
|
6 | F1Q749 (/IMP) O44081 (/IMP) O44081 (/IMP) P33322 (/IMP) Q498Z9 (/IMP) Q7ZUT3 (/IMP) |
Telomere maintenance via telomerase GO:0007004
The maintenance of proper telomeric length by the addition of telomeric repeats by telomerase.
|
4 | O60832 (/TAS) O60832 (/TAS) O60832 (/TAS) Q5ZJH9 (/TAS) |
Positive regulation of telomerase activity GO:0051973
Any process that activates or increases the frequency, rate or extent of telomerase activity, the catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).
|
4 | O60832 (/IMP) O60832 (/IMP) O60832 (/IMP) Q9ESX5 (/IMP) |
Enzyme-directed rRNA pseudouridine synthesis GO:0000455
The intramolecular conversion of uridine to pseudouridine during ribosome biogenesis where the enzyme specifies the site that becomes pseudouridylated without using a guide RNA.
|
3 | O60832 (/IMP) O60832 (/IMP) O60832 (/IMP) |
Enzyme-directed rRNA pseudouridine synthesis GO:0000455
The intramolecular conversion of uridine to pseudouridine during ribosome biogenesis where the enzyme specifies the site that becomes pseudouridylated without using a guide RNA.
|
3 | P40615 (/ISS) Q5ZJH9 (/ISS) Q9ESX5 (/ISS) |
RRNA processing GO:0006364
Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
|
3 | O60832 (/TAS) O60832 (/TAS) O60832 (/TAS) |
RNA processing GO:0006396
Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
|
3 | O60832 (/TAS) O60832 (/TAS) O60832 (/TAS) |
Telomere maintenance via telomerase GO:0007004
The maintenance of proper telomeric length by the addition of telomeric repeats by telomerase.
|
3 | O60832 (/IDA) O60832 (/IDA) O60832 (/IDA) |
Telomere maintenance via telomerase GO:0007004
The maintenance of proper telomeric length by the addition of telomeric repeats by telomerase.
|
3 | O60832 (/IMP) O60832 (/IMP) O60832 (/IMP) |
Telomere maintenance via telomerase GO:0007004
The maintenance of proper telomeric length by the addition of telomeric repeats by telomerase.
|
3 | P40615 (/ISS) Q5ZJH9 (/ISS) Q9ESX5 (/ISS) |
Showing 1 to 10 of 52 entries
There are 30 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
7 | O44081 (/IDA) O44081 (/IDA) P40615 (/IDA) Q9ESX5 (/IDA) Q9LD90 (/IDA) Q9LD90 (/IDA) Q9LD90 (/IDA) |
Box H/ACA snoRNP complex GO:0031429
A box H/ACA RNP complex that is located in the nucleolus.
|
5 | O60832 (/IDA) O60832 (/IDA) O60832 (/IDA) P33322 (/IDA) P40615 (/IDA) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
4 | O60832 (/TAS) O60832 (/TAS) O60832 (/TAS) Q5ZJH9 (/TAS) |
Telomerase holoenzyme complex GO:0005697
Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits.
|
4 | P40615 (/ISS) Q54T81 (/ISS) Q5ZJH9 (/ISS) Q9ESX5 (/ISS) |
Fibrillar center GO:0001650
A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.
|
3 | O60832 (/IDA) O60832 (/IDA) O60832 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
3 | O60832 (/IDA) O60832 (/IDA) O60832 (/IDA) |
Telomerase holoenzyme complex GO:0005697
Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits.
|
3 | O60832 (/IDA) O60832 (/IDA) O60832 (/IDA) |
Telomerase holoenzyme complex GO:0005697
Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits.
|
3 | O60832 (/TAS) O60832 (/TAS) O60832 (/TAS) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
3 | O60832 (/TAS) O60832 (/TAS) O60832 (/TAS) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
3 | Q9LD90 (/IDA) Q9LD90 (/IDA) Q9LD90 (/IDA) |
Showing 1 to 10 of 30 entries