CATH Superfamily 2.20.25.10

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
1	Probable Transcription elongation factor S-II	717	3D	3po3S02	-	91.3
2	UPF0434 protein YcaR	519	3D	2jr6A01	-	90.5
3	Alkylphosphonate utilization protein PhnA	401	3D	2aklA01	-	85.8
4	DNA-directed RNA polymerase subunit	384	3D	5flmI02	-	93.9
8	DNA-directed RNA polymerase II subunit RPB9	319	3D	5ip9I01	-	92.8
5	DNA-directed RNA polymerase subunit	273		-	-	91.9
6	Tenascin C	265		-	-	67.3
7	Transcription initiation factor IIB	233	3D	1ro4A00	-	75.3
11	peptide-N 4 N-acetyl-beta- glucosaminyl	202	3D	3eswA02	-	93.6
9	DNA-directed RNA polymerase subunit	201	3D	5flmI01	-	75.5
10	Two-component system response regulator	197		-	-	75.5
12	Putative transcription factor IIIB 90 kDa subunit	196		-	-	92.9
13	DNA topoisomerase 1	194	3D	1yuaA02	-	66.3
16	DNA-directed RNA polymerase II subunit RPB9	185	3D	5ip9I02	-	89.0
14	Transcription factor IIIB 50 kDa subunit	103		-	-	86.1
15	Multifunctional methyltransferase subunit TRM112-like protein	93		-	-	87.4
17	protein preY, mitochondrial	83		-	-	82.3
70	Terminal oxygenase component of carbazole	55	3D	4nbhC03	-	26.6
18	Multifunctional methyltransferase subunit TRM112-like B	54		-	-	89.6
21	Multifunctional methyltransferase subunit trm112	52	3D	4qtuC00	-	81.3
19	DNA-directed RNA polymerase subunit	50		-	-	46.4
20	DNA-directed RNA polymerase subunit	48		-	-	72.1
22	LytR family transcriptional regulator	42		-	-	13.3
23	Predicted protein	36		-	-	77.9
24	DNA-directed RNA polymerase subunit	31		-	-	60.7
25	UPF0434 protein SCO3027	30	3D	2kpiA01	-	25.5
26	DNA-directed RNA polymerase subunit	28		-	-	25.9
27	Multifunctional methyltransferase subunit TRM112-like protein	26		-	-	90.1
28	Transcription elongation factor A protein 1	22	3D	1tfiA00	-	21.8
29	DNA-directed RNA polymerase subunit M	21	3D	1qypA00	-	71.3
30	DNA-directed RNA polymerase II subunit RPB9	20		-	-	16.7
31	DNA-directed RNA polymerase subunit	19		-	-	76.3
32	DNA-directed RNA polymerase subunit	18		-	-	49.3
36	Transcription initiation factor IIB	17		-	-	84.4
37	Transcription initiation factor IIB	17		-	-	81.9
33	Transcription factor, putative	17		-	-	14.7
35	DNA-directed RNA polymerase subunit	17		-	-	72.1
34	tRNA m2G10 methyltransferase subunit, putative	17		-	-	6.3
39	DNA-directed RNA polymerase subunit	15		-	-	7.5
40	Putative DNA-direcetd RNA polymerase II, subunit 9	15		-	-	90.6
38	DNA-directed RNA polymerase 30 kDa polypeptide	15		-	-	1.9
41	DNA-directed RNA polymerase 2 subunit	14		-	-	5.2
42	Peptide-N 4 N-acetyl-beta-glucosaminyl	14		-	-	59.6
43	DNA-directed RNA polymerase subunit	13		-	-	31.5
44	BRF Transcription factor	13		-	-	32.6
57	Organic hydroperoxide resistance protein	13	3D	3lusB01	-	77.4
46	UPF0434 protein Rv1684	12		-	-	0.0
45	DNA-directed RNA polymerase subunit	12		-	-	44.5
47	DNA-directed RNA polymerase subunit	12		-	-	14.9
48	DNA-directed RNA polymerase subunit	11		-	-	8.2
49	DNA-directed RNA polymerase subunit	10		-	-	63.9
50	DNA-directed RNA polymerase subunit	10		-	-	67.5
51	DNA-directed RNA polymerase subunit	10		-	-	46.6
52	Transcription elongation factor-like protein	10		-	-	81.5
55	DNA-direcetd RNA polymerase II, subunit 9, putative	9		-	-	39.4
53	DNA-directed RNA polymerase subunit	9		-	-	43.8
54	DNA-directed RNA polymerase subunit	9		-	-	8.7
56	Multifunctional methyltransferase subunit TRM112-like protein	8		-	-	51.8
61	DNA-directed RNA polymerase II subunit, putative	7		-	-	0.0
60	DNA-directed RNA polymerase subunit	7		-	-	2.3
63	Positive transcription elongation factor, putative	7		-	-	13.1
62	Alkylphosphonate utilization protein	7		-	-	0.0
58	DNA-directed RNA polymerase subunit	7		-	-	42.1
64	Peptide-N 4 N-acetyl-beta-glucosaminyl	7		-	-	94.1
65	TFIIB zinc-binding, putative	7		-	-	9.4
66	DNA-directed RNA polymerase subunit	7		-	-	62.2
59	DNA-directed RNA polymerase subunit	7		-	-	11.3
68	Trm112p family protein	6		-	-	4.3
69	TRMT112 isoform 1	6		-	-	4.5
71	Peptide-N4- N-acetyl-beta-glucosaminyl	6		-	-	9.1
67	DNA-directed RNA polymerase subunit	6		-	-	11.7
76	DNA-directed RNA polymerase subunit	5		-	-	3.8
74	DNA-directed RNA polymerase I subunit	5		-	-	0.0
75	DNA-directed RNA polymerase subunit	5		-	-	5.7
72	Uncharacterized protein	5		-	-	52.4
73	Trm112p-like_protein_-_putative	5		-	-	10.2
78	DNA-directed RNA polymerase subunit	4		-	-	16.4
80	DNA-directed RNA polymerase subunit	4		-	-	0.0
82	Phosphonoacetate hydrolase	4		-	-	3.3
81	DNA-directed RNA polymerase subunit	4		-	-	20.3
84	transcription factor IIIB 90 kDa subunit isoform X1	4		-	-	11.1
77	DNA-directed RNA polymerase subunit	4		-	-	43.2
79	DNA-directed RNA polymerase subunit	4		-	-	0.0
83	DNA-directed RNA polymerase subunit	4		-	-	44.2
89	Uncharacterized protein	3		-	-	0.0
85	DNA-directed RNA polymerase subunit	3		-	-	8.4
86	Putative Trm112 family protein	3		-	-	8.8
87	DNA-directed RNA polymerase subunit	3		-	-	10.5
88	DNA-directed RNA polymerase subunit	3		-	-	8.8
91	DNA-directed RNA polymerase subunit	2		-	-	36.3
92	Uncharacterized protein	2		-	-	43.7
105	Uncharacterized protein	2		-	-	51.0
111	Predicted protein	2		-	-	50.8
99	Uncharacterized protein	2		-	-	0.0
90	DNA-directed RNA polymerase subunit	2		-	-	30.7
110	Bacterial MDR-like protein	2		-	-	8.6
102	DNA-directed RNA polymerase subunit	2		-	-	20.7
100	Uncharacterized protein	2		-	-	2.0
93	DNA-directed RNA polymerase subunit	2		-	-	20.0
103	Transcription factor S, archaeal	2		-	-	0.0
101	DNA-directed RNA polymerase subunit	2		-	-	1.8
96	DNA-directed RNA polymerase subunit	2		-	-	0.0
108	Transcription elongation factor s-II, putative	2		-	-	0.0
94	Uncharacterized protein	2		-	-	0.0
109	Peptide-N 4 N-acetyl-beta-glucosaminyl	2		-	-	0.0
95	DNA-directed RNA polymerase subunit	2		-	-	0.0
106	2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component	2		-	-	5.5
98	Putative conserved secreted protein	2		-	-	5.1
107	Plant-specific TFIIB-related protein PTF2	2		-	-	0.0
104	Transcription factor S, archaeal	2		-	-	0.0
97	DNA-directed RNA polymerase subunit	2		-	-	4.9
112	DNA-directed RNA polymerase subunit	1		-	-	0.0
128	Uncharacterized protein	1		-	-	0.0
132	DNA-directed RNA polymerase II 15.1 kDa polypeptide-related protein	1		-	-	0.0
129	DNA-directed RNA polymerase subunit	1		-	-	0.0
124	Predicted protein	1		-	-	0.0
113	DNA-directed RNA polymerase subunit	1		-	-	0.0
131	DNA-directed RNA polymerase subunit	1		-	-	0.0
119	Transcription factor S-II-like protein	1		-	-	0.0
125	Uncharacterized protein	1		-	-	0.0
118	DNA-directed RNA polymerase subunit	1		-	-	0.0
126	Uncharacterized protein	1		-	-	0.0
133	Predicted protein	1		-	-	0.0
134	Predicted protein	1		-	-	0.0
127	tRNA methyltransferase subunit 11-2	1		-	-	0.0
116	DNA-directed RNA polymerase subunit	1		-	-	0.0
136	Peptide-N 4 N-acetyl-beta-glucosaminyl	1		-	-	0.0
117	DNA-directed RNA polymerase subunit	1		-	-	0.0
135	Methyltransferase type 11	1		-	-	0.0
120	Uncharacterized protein	1		-	-	0.0
121	DNA-directed RNA polymerase subunit	1		-	-	0.0
130	DNA-directed RNA polymerase subunit	1		-	-	0.0
115	DNA-directed RNA polymerase subunit	1		-	-	0.0
122	Uncharacterized protein	1		-	-	0.0
114	DNA-directed RNA polymerase subunit	1		-	-	0.0
123	DNA-directed RNA polymerase subunit	1		-	-	0.0