The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"YVTN repeat-like/Quinoprotein amine dehydrogenase
".
FunFam 56: Polycomb protein eed
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 9 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
145 |
B5DF02 (/IPI)
B5DF02 (/IPI)
B5DF02 (/IPI)
B5DF02 (/IPI)
B5DF02 (/IPI)
B5DF02 (/IPI)
B5DF02 (/IPI)
B5DF02 (/IPI)
B5DF02 (/IPI)
B5DF02 (/IPI)
(135 more) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
96 |
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
(86 more) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
49 |
O75530 (/IPI)
O75530 (/IPI)
O75530 (/IPI)
O75530 (/IPI)
O75530 (/IPI)
O75530 (/IPI)
O75530 (/IPI)
O75530 (/IPI)
O75530 (/IPI)
O75530 (/IPI)
(39 more) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
48 |
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
(38 more) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
48 |
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
(38 more) |
Histone methyltransferase activity GO:0042054
Catalysis of the reaction: S-adenosyl-L-methionine + histone = S-adenosyl-L-homocysteine + methyl-histone. Histone methylation generally occurs on either an arginine or lysine residue.
|
48 |
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
(38 more) |
Histone methyltransferase activity GO:0042054
Catalysis of the reaction: S-adenosyl-L-methionine + histone = S-adenosyl-L-homocysteine + methyl-histone. Histone methylation generally occurs on either an arginine or lysine residue.
|
48 |
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
(38 more) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
48 |
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
(38 more) |
Enzyme activator activity GO:0008047
Binds to and increases the activity of an enzyme.
|
1 | Q24338 (/IDA) |
There are 21 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
48 |
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
(38 more) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
48 |
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
(38 more) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
48 |
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
(38 more) |
Regulation of gene expression by genetic imprinting GO:0006349
Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself.
|
48 |
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
(38 more) |
Histone methylation GO:0016571
The modification of histones by addition of methyl groups.
|
48 |
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
(38 more) |
Spinal cord development GO:0021510
The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues.
|
48 |
B5DF02 (/IEP)
B5DF02 (/IEP)
B5DF02 (/IEP)
B5DF02 (/IEP)
B5DF02 (/IEP)
B5DF02 (/IEP)
B5DF02 (/IEP)
B5DF02 (/IEP)
B5DF02 (/IEP)
B5DF02 (/IEP)
(38 more) |
Negative regulation of gene expression, epigenetic GO:0045814
Any epigenetic process that stops, prevents or reduces the rate of gene expression.
|
48 |
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
(38 more) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
48 |
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
(38 more) |
Positive regulation of histone H3-K27 methylation GO:0061087
Any process that increases the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.
|
48 |
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
Q921E6 (/IMP)
(38 more) |
Negative regulation of G0 to G1 transition GO:0070317
A cell cycle process that stops, prevents, or reduces the rate or extent of the transition from the G0 quiescent state to the G1 phase.
|
48 |
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
(38 more) |
Cellular response to leukemia inhibitory factor GO:1990830
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukemia inhibitory factor stimulus.
|
48 |
Q921E6 (/IEP)
Q921E6 (/IEP)
Q921E6 (/IEP)
Q921E6 (/IEP)
Q921E6 (/IEP)
Q921E6 (/IEP)
Q921E6 (/IEP)
Q921E6 (/IEP)
Q921E6 (/IEP)
Q921E6 (/IEP)
(38 more) |
Regulation of adaxial/abaxial pattern formation GO:2000011
Any process that modulates the frequency, rate or extent of adaxial/abaxial pattern formation.
|
48 |
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
Q921E6 (/IGI)
(38 more) |
Chromatin silencing GO:0006342
Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin.
|
1 | Q24338 (/IPI) |
Gene silencing GO:0016458
Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.
|
1 | Q24338 (/IGI) |
Gene silencing GO:0016458
Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.
|
1 | Q24338 (/IMP) |
Histone methylation GO:0016571
The modification of histones by addition of methyl groups.
|
1 | Q24338 (/IDA) |
Positive regulation of histone methylation GO:0031062
Any process that activates or increases the frequency, rate or extent of the covalent addition of methyl groups to histones.
|
1 | Q24338 (/IDA) |
Chromatin-mediated maintenance of transcription GO:0048096
Maintenance of transcription by remodelling of chromatin into an 'open configuration'. Once established, this regulation is mitotically stable and is maintained over many cell divisions. It is also heritable.
|
1 | Q26458 (/ISS) |
Chromatin-mediated maintenance of transcription GO:0048096
Maintenance of transcription by remodelling of chromatin into an 'open configuration'. Once established, this regulation is mitotically stable and is maintained over many cell divisions. It is also heritable.
|
1 | Q24338 (/NAS) |
Histone H3-K27 methylation GO:0070734
The modification of histone H3 by addition of one or more methyl groups to lysine at position 27 of the histone.
|
1 | Q9VKD5 (/IGI) |
Histone H3-K27 methylation GO:0070734
The modification of histone H3 by addition of one or more methyl groups to lysine at position 27 of the histone.
|
1 | Q24338 (/IMP) |
There are 16 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
98 |
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
B5DF02 (/IDA)
(88 more) |
ESC/E(Z) complex GO:0035098
A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12. In mammals the core subunits of the complex include EED, EZH2, SUZ12 and RBBP4.
|
98 |
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
(88 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
96 |
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
O75530 (/TAS)
(86 more) |
Sex chromatin GO:0001739
Chromatin that is part of a sex chromosome.
|
48 |
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
(38 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
48 |
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
(38 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
48 |
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
O75530 (/NAS)
(38 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
48 |
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
(38 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
48 |
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
(38 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
48 |
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
O75530 (/IDA)
(38 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
48 |
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
(38 more) |
ESC/E(Z) complex GO:0035098
A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12. In mammals the core subunits of the complex include EED, EZH2, SUZ12 and RBBP4.
|
48 |
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
Q921E6 (/ISO)
(38 more) |
Pronucleus GO:0045120
The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents.
|
48 |
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
Q921E6 (/IDA)
(38 more) |
ESC/E(Z) complex GO:0035098
A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12. In mammals the core subunits of the complex include EED, EZH2, SUZ12 and RBBP4.
|
6 | Q28DT7 (/ISS) Q3SZ25 (/ISS) Q566T0 (/ISS) Q5ZKH3 (/ISS) Q6AZS2 (/ISS) Q8UUP2 (/ISS) |
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
2 | Q24338 (/ISS) Q26458 (/ISS) |
Polytene chromosome GO:0005700
A type of chromosome in a polyploid cell, formed when multiple copies of homologous chromosomes are aligned side by side to give a giant chromosome in which distinct chromosome bands are readily visible.
|
1 | Q24338 (/IDA) |
Histone methyltransferase complex GO:0035097
A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins.
|
1 | Q24338 (/IDA) |