The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"YVTN repeat-like/Quinoprotein amine dehydrogenase
".
FunFam 55: DDB1 and CUL4-associated factor 1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
7 | Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) |
Estrogen receptor binding GO:0030331
Interacting selectively and non-covalently with an estrogen receptor.
|
7 | Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) Q9Y4B6 (/IPI) |
Histone kinase activity (H2A-T120 specific) GO:1990244
Catalysis of the transfer of a phosphate group to the threonine-120 residue of histone H2A.
|
7 | Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) |
Estrogen receptor binding GO:0030331
Interacting selectively and non-covalently with an estrogen receptor.
|
1 | Q80TR8 (/ISO) |
Histone kinase activity (H2A-T120 specific) GO:1990244
Catalysis of the transfer of a phosphate group to the threonine-120 residue of histone H2A.
|
1 | Q80TR8 (/ISO) |
Histone kinase activity (H2A-T120 specific) GO:1990244
Catalysis of the transfer of a phosphate group to the threonine-120 residue of histone H2A.
|
1 | Q80TR8 (/ISS) |
There are 13 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
7 | Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) |
B cell differentiation GO:0030183
The process in which a precursor cell type acquires the specialized features of a B cell. A B cell is a lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.
|
7 | Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) |
V(D)J recombination GO:0033151
The process in which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).
|
7 | Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) Q9Y4B6 (/ISS) |
Cell competition in a multicellular organism GO:0035212
Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells.
|
7 | Q9Y4B6 (/IMP) Q9Y4B6 (/IMP) Q9Y4B6 (/IMP) Q9Y4B6 (/IMP) Q9Y4B6 (/IMP) Q9Y4B6 (/IMP) Q9Y4B6 (/IMP) |
Histone H2A-T120 phosphorylation GO:1990245
The modification of histone H2A by the addition of a phosphate group to a threonine residue at position 120 of the histone.
|
7 | Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
1 | Q80TR8 (/ISO) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
1 | Q80TR8 (/ISS) |
B cell differentiation GO:0030183
The process in which a precursor cell type acquires the specialized features of a B cell. A B cell is a lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.
|
1 | Q80TR8 (/IMP) |
V(D)J recombination GO:0033151
The process in which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).
|
1 | Q80TR8 (/IMP) |
Cell competition in a multicellular organism GO:0035212
Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells.
|
1 | Q80TR8 (/ISO) |
Cell competition in a multicellular organism GO:0035212
Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells.
|
1 | Q80TR8 (/ISS) |
Histone H2A-T120 phosphorylation GO:1990245
The modification of histone H2A by the addition of a phosphate group to a threonine residue at position 120 of the histone.
|
1 | Q80TR8 (/ISO) |
Histone H2A-T120 phosphorylation GO:1990245
The modification of histone H2A by the addition of a phosphate group to a threonine residue at position 120 of the histone.
|
1 | Q80TR8 (/ISS) |
There are 6 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Fibrillar center GO:0001650
A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.
|
7 | Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
7 | Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) |
Cul4-RING E3 ubiquitin ligase complex GO:0080008
A ubiquitin ligase complex in which a cullin from the Cul4 family and a RING domain protein form the catalytic core; substrate specificity is conferred by an adaptor protein.
|
7 | Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) Q9Y4B6 (/IDA) |
Fibrillar center GO:0001650
A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.
|
1 | Q80TR8 (/ISO) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q80TR8 (/ISO) |
Cul4-RING E3 ubiquitin ligase complex GO:0080008
A ubiquitin ligase complex in which a cullin from the Cul4 family and a RING domain protein form the catalytic core; substrate specificity is conferred by an adaptor protein.
|
1 | Q80TR8 (/ISO) |