The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
Leucine-rich Repeat Variant
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 38: Coatomer subunit gamma

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 1 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
11 P53620 (/IPI) Q9Y678 (/IPI) Q9Y678 (/IPI) Q9Y678 (/IPI) Q9Y678 (/IPI) Q9Y678 (/IPI) Q9Y678 (/IPI) Q9Y678 (/IPI) Q9Y678 (/IPI) Q9Y678 (/IPI)
(1 more)

There are 22 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0006890
The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.
14 P53620 (/TAS) Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS)
(4 more)
Endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888
The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
13 Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS)
(3 more)
Establishment of Golgi localization GO:0051683
The directed movement of the Golgi to a specific location.
10 Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS)
Organelle transport along microtubule GO:0072384
The directed movement of an organelle along a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.
10 Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS)
Intra-Golgi vesicle-mediated transport GO:0006891
The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).
3 Q9UBF2 (/IDA) Q9UBF2 (/IDA) Q9UBF2 (/IDA)
Mitotic cytokinesis GO:0000281
A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells.
1 Q8I0G5 (/IMP)
Intra-Golgi vesicle-mediated transport GO:0006891
The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).
1 Q9QXK3 (/ISO)
Intra-Golgi vesicle-mediated transport GO:0006891
The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).
1 P53620 (/TAS)
Male meiosis cytokinesis GO:0007112
A cell cycle process that occurs as part of the male meiotic cell cycle and results in the division of the cytoplasm of a cell to produce two daughter cells.
1 Q8I0G5 (/IMP)
Open tracheal system development GO:0007424
The process whose specific outcome is the progression of an open tracheal system over time, from its formation to the mature structure. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles. An example of this is found in Drosophila melanogaster.
1 Q8I0G5 (/IMP)
Larval salivary gland morphogenesis GO:0007436
The process, occurring in the larva, by which the anatomical structures of the salivary gland are generated and organized.
1 Q8I0G5 (/IMP)
Chitin-based embryonic cuticle biosynthetic process GO:0008362
Synthesis, including the chemical reactions and pathways resulting in the formation of chitin and other components, and deposition of a chitin-based embryonic cuticle by the underlying epidermal epithelium. This tough, waterproof cuticle layer is essential to provide structural integrity of the larval body. An example of this is found in Drosophila melanogaster.
1 Q8I0G5 (/IMP)
Protein secretion GO:0009306
The controlled release of proteins from a cell.
1 Q8I0G5 (/IMP)
Regulation of lipid storage GO:0010883
Any process that modulates the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.
1 Q8I0G5 (/IDA)
Extracellular matrix organization GO:0030198
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix.
1 Q8I0G5 (/IMP)
Branch fusion, open tracheal system GO:0035147
Fusing of specific tracheal branches in an open tracheal system to branches from neighboring hemisegments to form a continuous tracheal network. Branch fusion is mediated by individual cells at the tip of each branch, which contact a similar cell and undergo a coordinated series of morphogenetic events that create a bicellular fusion joint.
1 Q8I0G5 (/IMP)
Lumen formation, open tracheal system GO:0035149
Creation of the central hole of a tube in an open tracheal system through which gases flow.
1 Q8I0G5 (/IMP)
Regulation of tube diameter, open tracheal system GO:0035158
Ensuring that a tube in an open tracheal system is of the correct diameter. When primary branches form their lumens are small (less than 2 micrometers) in caliber and must undergo regulated expansion during larval life to reach their mature size.
1 Q8I0G5 (/IMP)
Establishment of Golgi localization GO:0051683
The directed movement of the Golgi to a specific location.
1 Q4AEF8 (/IMP)
Establishment of Golgi localization GO:0051683
The directed movement of the Golgi to a specific location.
1 Q9QZE5 (/ISO)
Organelle transport along microtubule GO:0072384
The directed movement of an organelle along a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.
1 Q4AEF8 (/IMP)
Organelle transport along microtubule GO:0072384
The directed movement of an organelle along a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.
1 Q9QZE5 (/ISO)

There are 17 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
13 Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS)
(3 more)
Endoplasmic reticulum membrane GO:0005789
The lipid bilayer surrounding the endoplasmic reticulum.
13 Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS)
(3 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
13 Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS)
(3 more)
Transport vesicle GO:0030133
Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell.
13 Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9UBF2 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS) Q9Y678 (/TAS)
(3 more)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
11 Q8I0G5 (/IDA) Q9Y678 (/IDA) Q9Y678 (/IDA) Q9Y678 (/IDA) Q9Y678 (/IDA) Q9Y678 (/IDA) Q9Y678 (/IDA) Q9Y678 (/IDA) Q9Y678 (/IDA) Q9Y678 (/IDA)
(1 more)
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
10 Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS)
COPI vesicle coat GO:0030126
One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state.
10 Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS) Q9Y678 (/ISS)
COPI vesicle coat GO:0030126
One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state.
4 P53620 (/IDA) Q9UBF2 (/IDA) Q9UBF2 (/IDA) Q9UBF2 (/IDA)
Exocytic vesicle GO:0070382
A transport vesicle that mediates transport from an intracellular compartment to the plasma membrane, and fuses with the plasma membrane to release various cargo molecules, such as proteins or hormones, by exocytosis.
2 E2RPG9 (/IDA) F1PHS7 (/IDA)
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
1 Q4AEF8 (/IDA)
Golgi membrane GO:0000139
The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
1 Q9QZE5 (/ISO)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
1 Q8I0G5 (/IDA)
Endoplasmic reticulum-Golgi intermediate compartment GO:0005793
A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi and Golgi-to-ER transport.
1 Q8I0G5 (/IDA)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
1 Q9QZE5 (/ISO)
Cis-Golgi network GO:0005801
The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum.
1 Q8I0G5 (/IDA)
COPI vesicle coat GO:0030126
One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state.
1 Q9QXK3 (/ISO)
Acroblast GO:0036063
A cone-shaped structure in the head of a spermatozoon, which is formed by the coalescence of Golgi fragments following the completion of meiosis. The acroblast is situated adjacent to the acrosomal vesicle.
1 Q8I0G5 (/IDA)
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