The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Peptidase M41
".
FunFam 1: ATP-dependent zinc metalloprotease FtsH
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 15 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
122 |
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
(112 more) |
ATPase activity GO:0016887
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
|
122 |
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
(112 more) |
ATP-dependent peptidase activity GO:0004176
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds.
|
120 |
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
(110 more) |
Metalloendopeptidase activity GO:0004222
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
|
120 |
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
(110 more) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
120 |
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
(110 more) |
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
120 |
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
(110 more) |
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
120 |
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
(110 more) |
Manganese ion binding GO:0030145
Interacting selectively and non-covalently with manganese (Mn) ions.
|
120 |
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
(110 more) |
CTPase activity GO:0043273
Catalysis of the reaction: CTP + H2O = CDP + phosphate. May or may not be coupled to another reaction.
|
120 |
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
(110 more) |
ATPase activity GO:0016887
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
|
34 |
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
(24 more) |
Metalloendopeptidase activity GO:0004222
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
|
33 |
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
(23 more) |
ATP-dependent peptidase activity GO:0004176
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds.
|
8 | O80860 (/ISS) O80860 (/ISS) Q39102 (/ISS) Q39102 (/ISS) Q8W585 (/ISS) Q9FIM2 (/ISS) Q9FIM2 (/ISS) Q9SD67 (/ISS) |
Peptidase activity GO:0008233
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
|
8 | P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) |
Metallopeptidase activity GO:0008237
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
|
2 | O80860 (/ISS) O80860 (/ISS) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
2 | Q9WZ49 (/IPI) Q9WZ49 (/IPI) |
There are 15 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Proteolysis GO:0006508
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
|
120 |
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
(110 more) |
Proteolysis GO:0006508
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
|
120 |
P0AAI3 (/IMP)
P0AAI3 (/IMP)
P0AAI3 (/IMP)
P0AAI3 (/IMP)
P0AAI3 (/IMP)
P0AAI3 (/IMP)
P0AAI3 (/IMP)
P0AAI3 (/IMP)
P0AAI3 (/IMP)
P0AAI3 (/IMP)
(110 more) |
Proteolysis GO:0006508
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
|
34 |
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
A0A0J1HL43 (/ISS)
(24 more) |
Protein catabolic process GO:0030163
The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
|
12 |
O80860 (/IDA)
O80860 (/IDA)
P37476 (/IDA)
P37476 (/IDA)
P37476 (/IDA)
P37476 (/IDA)
P37476 (/IDA)
P37476 (/IDA)
P37476 (/IDA)
P37476 (/IDA)
(2 more) |
Sporulation GO:0043934
The process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure. A spore is a structure that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction.
|
8 | P37476 (/IMP) P37476 (/IMP) P37476 (/IMP) P37476 (/IMP) P37476 (/IMP) P37476 (/IMP) P37476 (/IMP) P37476 (/IMP) |
Cellular response to antibiotic GO:0071236
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
|
8 | Q9HV48 (/IMP) Q9HV48 (/IMP) Q9HV48 (/IMP) Q9HV48 (/IMP) Q9HV48 (/IMP) Q9HV48 (/IMP) Q9HV48 (/IMP) Q9HV48 (/IMP) |
PSII associated light-harvesting complex II catabolic process GO:0010304
The chemical reactions and pathways resulting in the breakdown of one or more components of the light-harvesting complex of photosystem II.
|
7 | O80860 (/TAS) O80860 (/TAS) Q39102 (/TAS) Q39102 (/TAS) Q8W585 (/TAS) Q9FH02 (/TAS) Q9FH02 (/TAS) |
Response to cytokinin GO:0009735
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
|
4 | O80860 (/IDA) O80860 (/IDA) Q9FH02 (/IDA) Q9FH02 (/IDA) |
Photoinhibition GO:0010205
The mechanism by which high light intensity inhibits photosynthesis through inactivation of the D1 protein of photosystem II.
|
4 | O80860 (/IMP) O80860 (/IMP) Q9FH02 (/IMP) Q9FH02 (/IMP) |
Photosystem II repair GO:0010206
Proteolysis of the damaged D1 protein and re-assembly of a new D1 subunit in the photosystem II following photoinhibition.
|
4 | O80860 (/IMP) O80860 (/IMP) Q55700 (/IMP) Q55700 (/IMP) |
Photosystem I assembly GO:0048564
The aggregation, arrangement and bonding together of a set of components to form a photosystem I complex on the thylakoid membrane.
|
4 | O80860 (/IMP) O80860 (/IMP) Q9FH02 (/IMP) Q9FH02 (/IMP) |
Chloroplast organization GO:0009658
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.
|
2 | O80860 (/IGI) O80860 (/IGI) |
Thylakoid membrane organization GO:0010027
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane.
|
2 | O80860 (/IMP) O80860 (/IMP) |
Photosystem II repair GO:0010206
Proteolysis of the damaged D1 protein and re-assembly of a new D1 subunit in the photosystem II following photoinhibition.
|
2 | Q39102 (/TAS) Q39102 (/TAS) |
Reactive oxygen species metabolic process GO:0072593
The chemical reactions and pathways involving a reactive oxygen species, any molecules or ions formed by the incomplete one-electron reduction of oxygen. They contribute to the microbicidal activity of phagocytes, regulation of signal transduction and gene expression, and the oxidative damage to biopolymers.
|
2 | O80860 (/IDA) O80860 (/IDA) |
There are 12 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Integral component of plasma membrane GO:0005887
The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
120 |
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
P0AAI3 (/ISM)
(110 more) |
Integral component of membrane GO:0016021
The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
120 |
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
P0AAI3 (/IDA)
(110 more) |
Membrane protein complex GO:0098796
Any protein complex that is part of a membrane.
|
120 |
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
P0AAI3 (/IPI)
(110 more) |
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
|
10 | O80860 (/IDA) O80860 (/IDA) Q39102 (/IDA) Q39102 (/IDA) Q8W585 (/IDA) Q9FH02 (/IDA) Q9FH02 (/IDA) Q9FIM2 (/IDA) Q9FIM2 (/IDA) Q9SD67 (/IDA) |
Chloroplast envelope GO:0009941
The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.
|
10 | O80860 (/IDA) O80860 (/IDA) Q39102 (/IDA) Q39102 (/IDA) Q8W585 (/IDA) Q9FH02 (/IDA) Q9FH02 (/IDA) Q9FIM2 (/IDA) Q9FIM2 (/IDA) Q9SD67 (/IDA) |
Cell septum GO:0030428
A structure composed of peptidoglycan and often chitin in addition to other materials. It usually forms perpendicular to the long axis of a cell or hypha and grows centripetally from the cell wall to the center of the cell and often functions in the compartmentalization of a cell into two daughter cells.
|
8 | P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) P37476 (/IDA) |
Chloroplast thylakoid GO:0009534
Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana.
|
7 | O80860 (/IDA) O80860 (/IDA) Q39102 (/IDA) Q39102 (/IDA) Q8W585 (/IDA) Q9FH02 (/IDA) Q9FH02 (/IDA) |
Chloroplast thylakoid membrane GO:0009535
The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
|
7 | O80860 (/IDA) O80860 (/IDA) Q39102 (/IDA) Q39102 (/IDA) Q8W585 (/IDA) Q9FH02 (/IDA) Q9FH02 (/IDA) |
Thylakoid GO:0009579
A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.
|
5 | O80860 (/IDA) O80860 (/IDA) Q8W585 (/IDA) Q9FH02 (/IDA) Q9FH02 (/IDA) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
5 | O80860 (/IDA) O80860 (/IDA) Q39102 (/IDA) Q39102 (/IDA) Q8W585 (/IDA) |
Thylakoid lumen GO:0031977
The volume enclosed by a thylakoid membrane.
|
4 | O80860 (/IDA) O80860 (/IDA) Q39102 (/IDA) Q39102 (/IDA) |
Thylakoid membrane GO:0042651
The pigmented membrane of any thylakoid.
|
2 | Q55700 (/IDA) Q55700 (/IDA) |