The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"ABC transporter type 1, transmembrane domain
".
FunFam 68: Transporter 1 ATP-binding cassette sub-family B
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 33 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
4 | P36370 (/IPI) P36370 (/IPI) Q03518 (/IPI) Q03518 (/IPI) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
4 | P36370 (/IDA) P36370 (/IDA) Q03518 (/IDA) Q03518 (/IDA) |
ADP binding GO:0043531
Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
|
4 | P36370 (/IDA) P36370 (/IDA) Q03518 (/IDA) Q03518 (/IDA) |
TAP2 binding GO:0046979
Interacting selectively and non-covalently with the TAP2 subunit of TAP (transporter associated with antigen processing) protein.
|
4 | P36370 (/IPI) P36370 (/IPI) Q03518 (/IPI) Q03518 (/IPI) |
Nucleotide binding GO:0000166
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
|
2 | P36370 (/IDA) P36370 (/IDA) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
2 | Q03518 (/IMP) Q03518 (/IMP) |
ATPase-coupled peptide antigen transmembrane transporter activity GO:0015433
Catalysis of the reaction: peptide antigen(in) + ATP = peptide antigen(out) + ADP + phosphate.
|
2 | P36370 (/TAS) P36370 (/TAS) |
ATPase activity GO:0016887
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
|
2 | P36370 (/IDA) P36370 (/IDA) |
MHC class Ib protein binding GO:0023029
Interacting selectively and non-covalently with major histocompatibility complex class Ib molecules.
|
2 | Q03518 (/IPI) Q03518 (/IPI) |
MHC class I protein binding GO:0042288
Interacting selectively and non-covalently with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation.
|
2 | P36370 (/IDA) P36370 (/IDA) |
Peptide antigen binding GO:0042605
Interacting selectively and non-covalently with an antigen peptide.
|
2 | Q03518 (/NAS) Q03518 (/NAS) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
2 | P36370 (/IPI) P36370 (/IPI) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
2 | Q03518 (/ISS) Q03518 (/ISS) |
TAP1 binding GO:0046978
Interacting selectively and non-covalently with the TAP1 subunit of TAP (transporter associated with antigen processing) protein.
|
2 | P36370 (/IPI) P36370 (/IPI) |
TAP1 binding GO:0046978
Interacting selectively and non-covalently with the TAP1 subunit of TAP (transporter associated with antigen processing) protein.
|
2 | Q03518 (/ISS) Q03518 (/ISS) |
Tapasin binding GO:0046980
Interacting selectively and non-covalently with tapasin, a member of the MHC class I loading complex which bridges the TAP peptide transporter to class I molecules.
|
2 | P36370 (/IDA) P36370 (/IDA) |
Tapasin binding GO:0046980
Interacting selectively and non-covalently with tapasin, a member of the MHC class I loading complex which bridges the TAP peptide transporter to class I molecules.
|
2 | P36370 (/IPI) P36370 (/IPI) |
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
|
2 | P36370 (/IDA) P36370 (/IDA) |
Peptide transmembrane transporter activity GO:1904680
Enables the transfer of a peptide from one side of a membrane to the other.
|
2 | Q03518 (/IMP) Q03518 (/IMP) |
Nucleotide binding GO:0000166
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
|
1 | P21958 (/ISO) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
1 | P21958 (/ISO) |
ATPase-coupled peptide antigen transmembrane transporter activity GO:0015433
Catalysis of the reaction: peptide antigen(in) + ATP = peptide antigen(out) + ADP + phosphate.
|
1 | P21958 (/EXP) |
ATPase activity GO:0016887
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
|
1 | P21958 (/ISO) |
MHC class Ib protein binding GO:0023029
Interacting selectively and non-covalently with major histocompatibility complex class Ib molecules.
|
1 | P21958 (/ISO) |
MHC class I protein binding GO:0042288
Interacting selectively and non-covalently with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation.
|
1 | P21958 (/IPI) |
MHC class I protein binding GO:0042288
Interacting selectively and non-covalently with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation.
|
1 | P21958 (/ISO) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
1 | P21958 (/ISO) |
ADP binding GO:0043531
Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
|
1 | P21958 (/ISO) |
TAP1 binding GO:0046978
Interacting selectively and non-covalently with the TAP1 subunit of TAP (transporter associated with antigen processing) protein.
|
1 | P21958 (/ISO) |
TAP2 binding GO:0046979
Interacting selectively and non-covalently with the TAP2 subunit of TAP (transporter associated with antigen processing) protein.
|
1 | P21958 (/ISO) |
Tapasin binding GO:0046980
Interacting selectively and non-covalently with tapasin, a member of the MHC class I loading complex which bridges the TAP peptide transporter to class I molecules.
|
1 | P21958 (/ISO) |
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
|
1 | P21958 (/ISO) |
Peptide transmembrane transporter activity GO:1904680
Enables the transfer of a peptide from one side of a membrane to the other.
|
1 | P21958 (/ISO) |
There are 13 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Peptide transport GO:0015833
The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
4 | P36370 (/IMP) P36370 (/IMP) Q03518 (/IMP) Q03518 (/IMP) |
Antigen processing and presentation of peptide antigen via MHC class I GO:0002474
The process in which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules.
|
2 | Q03518 (/TAS) Q03518 (/TAS) |
Antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent GO:0002479
The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class I molecule. Class I here refers to classical class I molecules.
|
2 | Q03518 (/TAS) Q03518 (/TAS) |
Antigen processing and presentation of endogenous peptide antigen via MHC class I GO:0019885
The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.
|
2 | Q03518 (/IMP) Q03518 (/IMP) |
Protection from natural killer cell mediated cytotoxicity GO:0042270
The process of protecting a cell from natural killer cell mediated cytotoxicity.
|
2 | P36370 (/IMP) P36370 (/IMP) |
Cytosol to endoplasmic reticulum transport GO:0046967
The directed movement of substances from the cytosol to the endoplasmic reticulum of a cell.
|
2 | Q03518 (/IMP) Q03518 (/IMP) |
Peptide antigen transport GO:0046968
The directed movement of a peptide antigen into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein.
|
2 | P36370 (/TAS) P36370 (/TAS) |
Vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane GO:1990668
The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane of the ERGIC. This can involve anterograde or retrograde transport vesicles.
|
2 | Q03518 (/TAS) Q03518 (/TAS) |
Defense response GO:0006952
Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
|
1 | P21958 (/IMP) |
Peptide transport GO:0015833
The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
1 | P21958 (/ISO) |
Antigen processing and presentation of endogenous peptide antigen via MHC class I GO:0019885
The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.
|
1 | P21958 (/ISO) |
Protection from natural killer cell mediated cytotoxicity GO:0042270
The process of protecting a cell from natural killer cell mediated cytotoxicity.
|
1 | P21958 (/ISO) |
Cytosol to endoplasmic reticulum transport GO:0046967
The directed movement of substances from the cytosol to the endoplasmic reticulum of a cell.
|
1 | P21958 (/ISO) |
There are 19 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
|
4 | A0A0S2Z5A6 (/IDA) A0A0S2Z5A6 (/IDA) Q03518 (/IDA) Q03518 (/IDA) |
Microtubule organizing center GO:0005815
An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
|
4 | A0A0S2Z5A6 (/IDA) A0A0S2Z5A6 (/IDA) Q03518 (/IDA) Q03518 (/IDA) |
MHC class I peptide loading complex GO:0042824
A large, multisubunit complex which consists of the MHC class I-beta 2 microglobulin dimer, the transporter associated with antigen presentation (TAP), tapasin (an MHC-encoded membrane protein), the chaperone calreticulin and the thiol oxidoreductase ERp57. Functions in the assembly of peptides with newly synthesized MHC class I molecules.
|
4 | P36370 (/IDA) P36370 (/IDA) Q03518 (/IDA) Q03518 (/IDA) |
TAP complex GO:0042825
A heterodimer composed of the subunits TAP1 and TAP2 (transporter associated with antigen presentation). Functions in the transport of antigenic peptides from the cytosol to the lumen of the endoplasmic reticulum.
|
4 | P36370 (/IDA) P36370 (/IDA) Q03518 (/IDA) Q03518 (/IDA) |
Phagocytic vesicle membrane GO:0030670
The lipid bilayer surrounding a phagocytic vesicle.
|
3 | P21958 (/TAS) Q03518 (/TAS) Q03518 (/TAS) |
Endoplasmic reticulum membrane GO:0005789
The lipid bilayer surrounding the endoplasmic reticulum.
|
2 | Q03518 (/TAS) Q03518 (/TAS) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
2 | Q03518 (/HDA) Q03518 (/HDA) |
Integral component of membrane GO:0016021
The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
2 | Q03518 (/IDA) Q03518 (/IDA) |
Integral component of endoplasmic reticulum membrane GO:0030176
The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
2 | Q03518 (/IDA) Q03518 (/IDA) |
Endoplasmic reticulum-Golgi intermediate compartment membrane GO:0033116
The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system.
|
2 | Q03518 (/TAS) Q03518 (/TAS) |
Intracellular membrane-bounded organelle GO:0043231
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
|
2 | P36370 (/IDA) P36370 (/IDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
1 | P21958 (/HDA) |
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
|
1 | P21958 (/ISO) |
Microtubule organizing center GO:0005815
An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
|
1 | P21958 (/ISO) |
Integral component of membrane GO:0016021
The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
1 | P21958 (/ISO) |
Integral component of endoplasmic reticulum membrane GO:0030176
The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
1 | P21958 (/ISO) |
MHC class I peptide loading complex GO:0042824
A large, multisubunit complex which consists of the MHC class I-beta 2 microglobulin dimer, the transporter associated with antigen presentation (TAP), tapasin (an MHC-encoded membrane protein), the chaperone calreticulin and the thiol oxidoreductase ERp57. Functions in the assembly of peptides with newly synthesized MHC class I molecules.
|
1 | P21958 (/ISO) |
TAP complex GO:0042825
A heterodimer composed of the subunits TAP1 and TAP2 (transporter associated with antigen presentation). Functions in the transport of antigenic peptides from the cytosol to the lumen of the endoplasmic reticulum.
|
1 | P21958 (/ISO) |
Intracellular membrane-bounded organelle GO:0043231
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
|
1 | P21958 (/ISO) |