The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 8: Lytic murein transglycosylase B

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 6 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Lytic transglycosylase activity GO:0008933
Catalysis of the specific cleavage of the beta-(1->4) glycosidic linkage between N-acetylmuramyl and N-acetylglucosaminyl residues in peptidoglycan, with the concomitant formation of 1,6-anhydro-N-acetylmuramyl residues.
27 P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA)
(17 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
23 P41052 (/IPI) P41052 (/IPI) P41052 (/IPI) P41052 (/IPI) P41052 (/IPI) P41052 (/IPI) P41052 (/IPI) P41052 (/IPI) P41052 (/IPI) P41052 (/IPI)
(13 more)
Calcium ion binding GO:0005509
Interacting selectively and non-covalently with calcium ions (Ca2+).
18 P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA)
(8 more)
Lytic endotransglycosylase activity GO:0008932
Catalysis of the specific cleavage of the beta-(1->4) glycosidic linkage between N-acetylmuramyl and N-acetylglucosaminyl residues in peptidoglycan, with the concomitant formation of 1,6-anhydro-N-acetylmuramyl residues. Acts on linkages within peptidoglycan chains (i.e. not at the ends) to produce shorter strands with 1,6-anhydromuramic acid ends.
18 P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA)
(8 more)
Sodium ion binding GO:0031402
Interacting selectively and non-covalently with sodium ions (Na+).
18 P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA)
(8 more)
Catalytic activity GO:0003824
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
2 Q606A8 (/ISS) Q8EHQ1 (/ISS)

There are 3 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Peptidoglycan catabolic process GO:0009253
The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls.
18 P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA)
(8 more)
Peptidoglycan catabolic process GO:0009253
The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls.
18 P41052 (/IMP) P41052 (/IMP) P41052 (/IMP) P41052 (/IMP) P41052 (/IMP) P41052 (/IMP) P41052 (/IMP) P41052 (/IMP) P41052 (/IMP) P41052 (/IMP)
(8 more)
Peptidoglycan catabolic process GO:0009253
The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls.
2 Q606A8 (/ISS) Q8EHQ1 (/ISS)

There are 2 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cell outer membrane GO:0009279
A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.
18 P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA) P41052 (/IDA)
(8 more)
Outer membrane-bounded periplasmic space GO:0030288
The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.
18 P41052 (/TAS) P41052 (/TAS) P41052 (/TAS) P41052 (/TAS) P41052 (/TAS) P41052 (/TAS) P41052 (/TAS) P41052 (/TAS) P41052 (/TAS) P41052 (/TAS)
(8 more)
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