The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Transferase(Phosphotransferase) domain 1
".
FunFam 203: Cyclin-dependent kinase 9
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 28 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
19 |
O17432 (/IPI)
O17432 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
(9 more) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
16 |
P50750 (/ISS)
P50750 (/ISS)
P50750 (/ISS)
P50750 (/ISS)
P50750 (/ISS)
P50750 (/ISS)
P50750 (/ISS)
P50750 (/ISS)
P50750 (/ISS)
P50750 (/ISS)
(6 more) |
Cyclin-dependent protein serine/threonine kinase activity GO:0004693
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. This reaction requires the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK).
|
16 |
O17432 (/IDA)
O17432 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(6 more) |
RNA polymerase II CTD heptapeptide repeat kinase activity GO:0008353
Catalysis of the reaction: ATP + (DNA-directed RNA polymerase II) = ADP + phospho-(DNA-directed RNA polymerase II); phosphorylation occurs on residues in the carboxy-terminal domain (CTD) repeats.
|
16 |
O17432 (/IDA)
O17432 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(6 more) |
Transcription coactivator binding GO:0001223
Interacting selectively and non-covalently with a transcription coactivator, any protein involved in positive regulation of transcription via protein-protein interactions with transcription factors and other proteins that positively regulate transcription. Transcription coactivators do not bind DNA directly, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery.
|
14 |
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
P50750 (/IPI)
(4 more) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
14 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(4 more) |
Protein kinase activity GO:0004672
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Protein serine/threonine kinase activity GO:0004674
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Cyclin-dependent protein serine/threonine kinase activity GO:0004693
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. This reaction requires the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK).
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Kinase activity GO:0016301
Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
7SK snRNA binding GO:0097322
Interacting selectively and non-covalently with a 7SK small nuclear RNA (7SK snRNA).
|
14 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(4 more) |
7SK snRNA binding GO:0097322
Interacting selectively and non-covalently with a 7SK small nuclear RNA (7SK snRNA).
|
8 | Q5EAB2 (/ISS) Q5EAB2 (/ISS) Q641Z4 (/ISS) Q641Z4 (/ISS) Q641Z4 (/ISS) Q99J95 (/ISS) Q99J95 (/ISS) Q99J95 (/ISS) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
6 | Q641Z4 (/IDA) Q641Z4 (/IDA) Q641Z4 (/IDA) Q99J95 (/IDA) Q99J95 (/IDA) Q99J95 (/IDA) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
3 | Q99J95 (/IDA) Q99J95 (/IDA) Q99J95 (/IDA) |
Transcription coactivator binding GO:0001223
Interacting selectively and non-covalently with a transcription coactivator, any protein involved in positive regulation of transcription via protein-protein interactions with transcription factors and other proteins that positively regulate transcription. Transcription coactivators do not bind DNA directly, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Cyclin-dependent protein serine/threonine kinase activity GO:0004693
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. This reaction requires the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK).
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
3 | Q641Z4 (/IPI) Q641Z4 (/IPI) Q641Z4 (/IPI) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
RNA polymerase II CTD heptapeptide repeat kinase activity GO:0008353
Catalysis of the reaction: ATP + (DNA-directed RNA polymerase II) = ADP + phospho-(DNA-directed RNA polymerase II); phosphorylation occurs on residues in the carboxy-terminal domain (CTD) repeats.
|
3 | Q99J95 (/IMP) Q99J95 (/IMP) Q99J95 (/IMP) |
RNA polymerase II CTD heptapeptide repeat kinase activity GO:0008353
Catalysis of the reaction: ATP + (DNA-directed RNA polymerase II) = ADP + phospho-(DNA-directed RNA polymerase II); phosphorylation occurs on residues in the carboxy-terminal domain (CTD) repeats.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
SnRNA binding GO:0017069
Interacting selectively and non-covalently with a small nuclear RNA (snRNA).
|
3 | Q99J95 (/IDA) Q99J95 (/IDA) Q99J95 (/IDA) |
Protein kinase binding GO:0019901
Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
|
3 | Q99J95 (/IDA) Q99J95 (/IDA) Q99J95 (/IDA) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
3 | Q99J95 (/IDA) Q99J95 (/IDA) Q99J95 (/IDA) |
7SK snRNA binding GO:0097322
Interacting selectively and non-covalently with a 7SK small nuclear RNA (7SK snRNA).
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Cyclin-dependent protein serine/threonine kinase activity GO:0004693
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. This reaction requires the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK).
|
2 | O17432 (/ISS) O17432 (/ISS) |
RNA polymerase II CTD heptapeptide repeat kinase activity GO:0008353
Catalysis of the reaction: ATP + (DNA-directed RNA polymerase II) = ADP + phospho-(DNA-directed RNA polymerase II); phosphorylation occurs on residues in the carboxy-terminal domain (CTD) repeats.
|
2 | O17432 (/TAS) O17432 (/TAS) |
There are 44 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Positive regulation of histone phosphorylation GO:0033129
Any process that activates or increases the frequency, rate or extent of the addition of one or more phosphate groups to a histone protein.
|
17 |
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
(7 more) |
Positive regulation of histone H2B ubiquitination GO:2001168
Any process that activates or increases the frequency, rate or extent of histone H2B ubiquitination.
|
17 |
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
(7 more) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
16 |
O17432 (/IMP)
O17432 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
(6 more) |
Regulation of DNA repair GO:0006282
Any process that modulates the frequency, rate or extent of DNA repair.
|
14 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(4 more) |
Transcription by RNA polymerase II GO:0006366
The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Transcription initiation from RNA polymerase II promoter GO:0006367
Any process involved in the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription.
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Transcription elongation from RNA polymerase II promoter GO:0006368
The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase II promoter by the addition of ribonucleotides catalyzed by RNA polymerase II.
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Protein phosphorylation GO:0006468
The process of introducing a phosphate group on to a protein.
|
14 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(4 more) |
Cell population proliferation GO:0008283
The multiplication or reproduction of cells, resulting in the expansion of a cell population.
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Regulation of histone modification GO:0031056
Any process that modulates the frequency, rate or extent of the covalent alteration of a histone.
|
14 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(4 more) |
Replication fork processing GO:0031297
The process in which a DNA replication fork that has stalled is restored to a functional state and replication is restarted. The stalling may be due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes.
|
14 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(4 more) |
SnRNA transcription by RNA polymerase II GO:0042795
The synthesis of small nuclear RNA (snRNA) from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II promoter.
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Positive regulation of viral transcription GO:0050434
Any process that activates or increases the frequency, rate or extent of viral transcription.
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Regulation of muscle cell differentiation GO:0051147
Any process that modulates the frequency, rate or extent of muscle cell differentiation.
|
14 |
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
(4 more) |
Negative regulation of cell cycle arrest GO:0071157
Any process that decreases the rate, frequency, or extent of cell cycle arrest, the process in which the cell cycle is halted during one of the normal phases.
|
14 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(4 more) |
Cellular response to cytokine stimulus GO:0071345
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.
|
14 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(4 more) |
Negative regulation of mRNA polyadenylation GO:1900364
Any process that stops, prevents or reduces the frequency, rate or extent of mRNA polyadenylation.
|
14 |
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
P50750 (/IMP)
(4 more) |
Positive regulation of mRNA 3'-UTR binding GO:1903839
Any process that activates or increases the frequency, rate or extent of mRNA 3'-UTR binding.
|
14 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(4 more) |
Regulation of DNA repair GO:0006282
Any process that modulates the frequency, rate or extent of DNA repair.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Protein phosphorylation GO:0006468
The process of introducing a phosphate group on to a protein.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Positive regulation of cardiac muscle hypertrophy GO:0010613
Any process that increases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division.
|
3 | Q641Z4 (/IMP) Q641Z4 (/IMP) Q641Z4 (/IMP) |
Positive regulation of cardiac muscle hypertrophy GO:0010613
Any process that increases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Regulation of histone modification GO:0031056
Any process that modulates the frequency, rate or extent of the covalent alteration of a histone.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Replication fork processing GO:0031297
The process in which a DNA replication fork that has stalled is restored to a functional state and replication is restarted. The stalling may be due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Positive regulation of histone phosphorylation GO:0033129
Any process that activates or increases the frequency, rate or extent of the addition of one or more phosphate groups to a histone protein.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Response to drug GO:0042493
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
|
3 | Q641Z4 (/IEP) Q641Z4 (/IEP) Q641Z4 (/IEP) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Regulation of muscle cell differentiation GO:0051147
Any process that modulates the frequency, rate or extent of muscle cell differentiation.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Negative regulation of cell cycle arrest GO:0071157
Any process that decreases the rate, frequency, or extent of cell cycle arrest, the process in which the cell cycle is halted during one of the normal phases.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Cellular response to cytokine stimulus GO:0071345
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Negative regulation of mRNA polyadenylation GO:1900364
Any process that stops, prevents or reduces the frequency, rate or extent of mRNA polyadenylation.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Positive regulation of mRNA 3'-UTR binding GO:1903839
Any process that activates or increases the frequency, rate or extent of mRNA 3'-UTR binding.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Positive regulation of histone H2B ubiquitination GO:2001168
Any process that activates or increases the frequency, rate or extent of histone H2B ubiquitination.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Positive regulation of defense response to virus by host GO:0002230
Any host process that results in the promotion of antiviral immune response mechanisms, thereby limiting viral replication.
|
2 | O17432 (/IMP) O17432 (/IMP) |
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
|
2 | O17432 (/IDA) O17432 (/IDA) |
Transcription elongation from RNA polymerase II promoter GO:0006368
The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase II promoter by the addition of ribonucleotides catalyzed by RNA polymerase II.
|
2 | O17432 (/IDA) O17432 (/IDA) |
Protein phosphorylation GO:0006468
The process of introducing a phosphate group on to a protein.
|
2 | O17432 (/ISS) O17432 (/ISS) |
Response to heat GO:0009408
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
|
2 | O17432 (/IDA) O17432 (/IDA) |
Regulation of cardiac muscle cell proliferation GO:0060043
Any process that modulates the frequency, rate or extent of cardiac muscle cell proliferation.
|
2 | Q7SXE8 (/IGI) Q7T3L5 (/IGI) |
Regulation of cardiac muscle cell proliferation GO:0060043
Any process that modulates the frequency, rate or extent of cardiac muscle cell proliferation.
|
2 | Q7SXE8 (/IMP) Q7T3L5 (/IMP) |
Cardiac muscle tissue regeneration GO:0061026
The regrowth of cardiac muscle tissue to repair injured or damaged muscle fibers in the postnatal stage.
|
2 | Q7SXE8 (/IGI) Q7T3L5 (/IGI) |
Cardiac muscle tissue regeneration GO:0061026
The regrowth of cardiac muscle tissue to repair injured or damaged muscle fibers in the postnatal stage.
|
2 | Q7SXE8 (/IMP) Q7T3L5 (/IMP) |
Inflammatory response to wounding GO:0090594
The immediate defensive reaction by vertebrate tissue to injury caused by chemical or physical agents.
|
2 | Q7SXE8 (/IMP) Q7T3L5 (/IMP) |
There are 21 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
28 |
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
(18 more) |
Cytoplasmic ribonucleoprotein granule GO:0036464
A ribonucleoprotein granule located in the cytoplasm.
|
28 |
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
A0A024R880 (/IDA)
(18 more) |
Cyclin/CDK positive transcription elongation factor complex GO:0008024
A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.
|
17 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(7 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Transcription elongation factor complex GO:0008023
Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation.
|
14 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(4 more) |
Transcription elongation factor complex GO:0008023
Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation.
|
14 |
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
P50750 (/TAS)
(4 more) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
14 |
P50750 (/HDA)
P50750 (/HDA)
P50750 (/HDA)
P50750 (/HDA)
P50750 (/HDA)
P50750 (/HDA)
P50750 (/HDA)
P50750 (/HDA)
P50750 (/HDA)
P50750 (/HDA)
(4 more) |
PML body GO:0016605
A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection.
|
14 |
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
P50750 (/IDA)
(4 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
8 | O17432 (/IDA) O17432 (/IDA) Q641Z4 (/IDA) Q641Z4 (/IDA) Q641Z4 (/IDA) Q99J95 (/IDA) Q99J95 (/IDA) Q99J95 (/IDA) |
Transcription elongation factor complex GO:0008023
Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation.
|
8 | Q5EAB2 (/ISS) Q5EAB2 (/ISS) Q641Z4 (/ISS) Q641Z4 (/ISS) Q641Z4 (/ISS) Q99J95 (/ISS) Q99J95 (/ISS) Q99J95 (/ISS) |
Cyclin/CDK positive transcription elongation factor complex GO:0008024
A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.
|
8 | Q5EAB2 (/ISS) Q5EAB2 (/ISS) Q641Z4 (/ISS) Q641Z4 (/ISS) Q641Z4 (/ISS) Q99J95 (/ISS) Q99J95 (/ISS) Q99J95 (/ISS) |
Cyclin/CDK positive transcription elongation factor complex GO:0008024
A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.
|
5 | O17432 (/TAS) O17432 (/TAS) Q99J95 (/TAS) Q99J95 (/TAS) Q99J95 (/TAS) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Transcription elongation factor complex GO:0008023
Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Cyclin/CDK positive transcription elongation factor complex GO:0008024
A transcription elongation factor complex that facilitates the transition from abortive to productive elongation by phosphorylating the CTD domain of the large subunit of DNA-directed RNA polymerase II, holoenzyme. Contains a cyclin and a cyclin-dependent protein kinase catalytic subunit.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
PML body GO:0016605
A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Cytoplasmic ribonucleoprotein granule GO:0036464
A ribonucleoprotein granule located in the cytoplasm.
|
3 | Q99J95 (/ISO) Q99J95 (/ISO) Q99J95 (/ISO) |
Polytene chromosome GO:0005700
A type of chromosome in a polyploid cell, formed when multiple copies of homologous chromosomes are aligned side by side to give a giant chromosome in which distinct chromosome bands are readily visible.
|
2 | O17432 (/IDA) O17432 (/IDA) |
Polytene chromosome puff GO:0005703
A swelling at a site along the length of a polytene chromosome, thought to be the site of active transcription.
|
2 | O17432 (/IDA) O17432 (/IDA) |
ELL-EAF complex GO:0032783
A heterodimeric protein complex that acts as an RNA polymerase II elongation factor; the complex is conserved from yeast to humans, and is present in S. pombe, but absent from S. cerevisiae.
|
2 | O17432 (/IPI) O17432 (/IPI) |