The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Peroxidase, domain 2
".
FunFam 1: Peroxidase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Peroxidase activity GO:0004601
Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
|
9 | Q8RVP3 (/IDA) Q8RVP6 (/IDA) Q8RVP7 (/IDA) Q96512 (/IDA) Q96512 (/IDA) Q9LEH3 (/IDA) Q9SD46 (/IDA) Q9SJZ2 (/IDA) Q9XGV6 (/IDA) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
4 | Q43731 (/IPI) Q43731 (/IPI) Q9FLC0 (/IPI) Q9SZE7 (/IPI) |
Peroxidase activity GO:0004601
Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
|
3 | P24101 (/IMP) Q9SMU8 (/IMP) Q9SMU8 (/IMP) |
Heme binding GO:0020037
Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
|
1 | Q9LEH3 (/IDA) |
There are 24 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Response to salt stress GO:0009651
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
|
5 | O80912 (/IEP) P24102 (/IEP) P24102 (/IEP) P24102 (/IEP) Q9SZE7 (/IEP) |
Response to cytokinin GO:0009735
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
|
5 | Q9LHB9 (/IDA) Q9LHB9 (/IDA) Q9LHB9 (/IDA) Q9SMU8 (/IDA) Q9SMU8 (/IDA) |
Lignin biosynthetic process GO:0009809
The chemical reactions and pathways resulting in the formation of lignins, a class of polymers formed by the dehydrogenetive radical polymerization of various phenylpropanoid monomers.
|
4 | Q9FJZ9 (/IMP) Q9FJZ9 (/IMP) Q9FLC0 (/IMP) Q9SJZ2 (/IMP) |
Pattern recognition receptor signaling pathway GO:0002221
Any series of molecular signals generated as a consequence of a pattern recognition receptor (PRR) binding to one of its physiological ligands. PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species, or damage-associated molecular pattern (DAMPs), endogenous molecules released from damaged cells.
|
3 | P24101 (/IMP) Q9SMU8 (/IMP) Q9SMU8 (/IMP) |
Defense response GO:0006952
Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
|
3 | P24101 (/IMP) Q9SMU8 (/IMP) Q9SMU8 (/IMP) |
Response to light stimulus GO:0009416
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.
|
3 | P24101 (/IEP) Q9SMU8 (/IEP) Q9SMU8 (/IEP) |
Unidimensional cell growth GO:0009826
The process in which a cell irreversibly increases in size in one
|
3 | P24101 (/IMP) Q9SMU8 (/IMP) Q9SMU8 (/IMP) |
Response to zinc ion GO:0010043
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.
|
3 | P24102 (/IEP) P24102 (/IEP) P24102 (/IEP) |
Defense response to bacterium GO:0042742
Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
|
3 | P24101 (/IMP) Q9SMU8 (/IMP) Q9SMU8 (/IMP) |
Defense response to fungus GO:0050832
Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
|
3 | P24101 (/IMP) Q9SMU8 (/IMP) Q9SMU8 (/IMP) |
Cellular response to hypoxia GO:0071456
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
|
3 | Q9LE15 (/IEP) Q9LE15 (/IEP) Q9M9Q9 (/IEP) |
Reactive oxygen species metabolic process GO:0072593
The chemical reactions and pathways involving a reactive oxygen species, any molecules or ions formed by the incomplete one-electron reduction of oxygen. They contribute to the microbicidal activity of phagocytes, regulation of signal transduction and gene expression, and the oxidative damage to biopolymers.
|
3 | P24101 (/IMP) Q9SMU8 (/IMP) Q9SMU8 (/IMP) |
Defense response to bacterium, incompatible interaction GO:0009816
A response of an organism to a bacterium that prevents the occurrence or spread of disease.
|
2 | Q8RVP7 (/IEP) Q9XGV6 (/IEP) |
Anther wall tapetum development GO:0048658
The process whose specific outcome is the progression of the anther wall tapetum over time, from its formation to the mature structure.
|
2 | Q96512 (/IGI) Q96512 (/IGI) |
Defense response to nematode GO:0002215
A response to protect an organism from a directly detected or perceived external threat from a nematode or nematodes, which results in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
|
1 | Q42578 (/IMP) |
Pollen development GO:0009555
The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates.
|
1 | A8W7V9 (/IEP) |
Plant-type cell wall modification GO:0009827
The series of events leading to chemical and structural alterations of an existing cellulose and pectin-containing cell wall that can result in loosening, increased extensibility or disassembly. An example of this is found in Arabidopsis thaliana.
|
1 | Q9SD46 (/IMP) |
Flower development GO:0009908
The process whose specific outcome is the progression of the flower over time, from its formation to the mature structure. The flower is the reproductive structure in a plant, and its development begins with the transition of the vegetative or inflorescence meristem into a floral meristem.
|
1 | Q42578 (/IMP) |
Xylem development GO:0010089
The formation of the principal water-conducting tissue of a vascular plant.
|
1 | Q9FLC0 (/IMP) |
Vegetative to reproductive phase transition of meristem GO:0010228
The process involved in transforming a meristem that produces vegetative structures, such as leaves, into a meristem that produces reproductive structures, such as a flower or an inflorescence.
|
1 | Q9SJZ2 (/IMP) |
Cell wall polysaccharide catabolic process GO:0044347
The chemical reactions and pathways resulting in the breakdown of cell wall polysaccharides.
|
1 | Q9SD46 (/IMP) |
Negative regulation of growth GO:0045926
Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism.
|
1 | Q9LDN9 (/IMP) |
Mucilage extrusion from seed coat GO:0080001
The process in which seed mucilage expands through hydration and breaks the outer cell wall that encapsulates the whole seed upon imbibition. Mucilage, mainly composed of pectins, is formed during seed development and deposited into the apoplast underneath the outer wall of the seed coat.
|
1 | Q9SD46 (/IMP) |
Positive regulation of syringal lignin biosynthetic process GO:1901430
Any process that activates or increases the frequency, rate or extent of syringal lignin biosynthetic process.
|
1 | Q9FLC0 (/IMP) |
There are 12 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
14 |
O23237 (/IDA)
O23237 (/IDA)
Q8RVP3 (/IDA)
Q8RVP6 (/IDA)
Q8RVP7 (/IDA)
Q9FLC0 (/IDA)
Q9LHB9 (/IDA)
Q9LHB9 (/IDA)
Q9LHB9 (/IDA)
Q9SI16 (/IDA)
(4 more) |
Vacuole GO:0005773
A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol.
|
8 | P24101 (/IDA) Q9LDA4 (/IDA) Q9LDN9 (/IDA) Q9LHB9 (/IDA) Q9LHB9 (/IDA) Q9LHB9 (/IDA) Q9SMU8 (/IDA) Q9SMU8 (/IDA) |
Plant-type cell wall GO:0009505
A more or less rigid stucture lying outside the cell membrane of a cell and composed of cellulose and pectin and other organic and inorganic substances.
|
8 | P24101 (/IDA) P24102 (/IDA) P24102 (/IDA) P24102 (/IDA) Q9SD46 (/IDA) Q9SJZ2 (/IDA) Q9SMU8 (/IDA) Q9SMU8 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
7 | Q39034 (/IDA) Q43731 (/IDA) Q43731 (/IDA) Q8RVP3 (/IDA) Q8RVP6 (/IDA) Q8RVP7 (/IDA) Q9XGV6 (/IDA) |
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
|
4 | Q42578 (/IDA) Q9FLC0 (/IDA) Q9SMU8 (/IDA) Q9SMU8 (/IDA) |
Middle lamella GO:0009519
Layer of intercellular material, chiefly pectic substances, cementing together the primary walls of contiguous cells.
|
4 | Q8RVP3 (/IDA) Q8RVP6 (/IDA) Q8RVP7 (/IDA) Q9XGV6 (/IDA) |
Secondary cell wall GO:0009531
A plant cell wall that is no longer able to expand and so does not permit growth. Secondary cell walls contain less pectin that primary cell walls. The secondary cell is mostly composed of cellulose and is strengthened with lignin.
|
4 | Q8RVP3 (/IDA) Q8RVP6 (/IDA) Q8RVP7 (/IDA) Q9XGV6 (/IDA) |
Vacuolar membrane GO:0005774
The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.
|
3 | Q9FG34 (/IDA) Q9SMU8 (/IDA) Q9SMU8 (/IDA) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
3 | Q9LHB9 (/IDA) Q9LHB9 (/IDA) Q9LHB9 (/IDA) |
Apoplast GO:0048046
The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it.
|
3 | Q9FLC0 (/IDA) Q9SMU8 (/IDA) Q9SMU8 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
2 | Q9FLC0 (/IDA) Q9SJZ2 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q39034 (/IDA) |