CATH Superfamily 1.10.287.1240
The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 1: Exodeoxyribonuclease I
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Magnesium ion binding GO:0000287
Interacting selectively and non-covalently with magnesium (Mg) ions.
|
6 | P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) |
|
Single-stranded DNA binding GO:0003697
Interacting selectively and non-covalently with single-stranded DNA.
|
6 | P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
6 | P04995 (/IPI) P04995 (/IPI) P04995 (/IPI) P04995 (/IPI) P04995 (/IPI) P04995 (/IPI) |
|
Single-stranded DNA 3'-5' exodeoxyribonuclease activity GO:0008310
Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a single-stranded DNA molecule.
|
6 | P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) |
|
Exodeoxyribonuclease I activity GO:0008852
Catalysis of the degradation of single-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides.
|
6 | P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) |
|
5'-deoxyribose-5-phosphate lyase activity GO:0051575
Catalysis of the beta-elimination of the 5' deoxyribose-5-phosphate at an abasic site in DNA where a DNA-(apurinic or apyrimidinic site) lyase has already cleaved the C-O-P bond 3' to the apurinic or apyrimidinic site.
|
6 | P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) |
There are 2 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
DNA catabolic process, exonucleolytic GO:0000738
The chemical reactions and pathways resulting in the breakdown of DNA, involving the hydrolysis of terminal 3',5'-phosphodiester bonds in one or two strands of deoxyribonucleotides.
|
6 | P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) |
|
DNA catabolic process GO:0006308
The cellular DNA metabolic process resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one.
|
6 | P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) P04995 (/IDA) |
There are 0 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
