The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Tyrosyl-Transfer RNA Synthetase
".
FunFam 1: Tyrosine--tRNA ligase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 22 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Tyrosine-tRNA ligase activity GO:0004831
Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H(+).
|
103 |
P00952 (/IDA)
P00952 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
(93 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
10 | Q97NE3 (/IPI) Q97NE3 (/IPI) Q97NE3 (/IPI) Q97NE3 (/IPI) Q97NE3 (/IPI) Q97NE3 (/IPI) Q97NE3 (/IPI) Q97NE3 (/IPI) Q97NE3 (/IPI) Q9Y2Z4 (/IPI) |
Tyrosine-tRNA ligase activity GO:0004831
Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H(+).
|
6 | O74890 (/ISS) Q54WD9 (/ISS) Q9KUQ0 (/ISS) Q9KUQ0 (/ISS) Q9KUQ0 (/ISS) Q9W107 (/ISS) |
Tyrosine-tRNA ligase activity GO:0004831
Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H(+).
|
5 | P48527 (/IGI) P48527 (/IGI) P48527 (/IGI) P48527 (/IGI) P48527 (/IGI) |
TRNA binding GO:0000049
Interacting selectively and non-covalently with transfer RNA.
|
3 | P00952 (/IDA) P00952 (/IDA) Q9Y2Z4 (/IDA) |
TRNA binding GO:0000049
Interacting selectively and non-covalently with transfer RNA.
|
2 | P00952 (/IMP) P00952 (/IMP) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
2 | P12063 (/IDA) P12063 (/IDA) |
Tyrosine-tRNA ligase activity GO:0004831
Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H(+).
|
2 | Q59WU2 (/ISO) Q8BYL4 (/ISO) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
2 | P00952 (/IDA) P00952 (/IDA) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
2 | P12063 (/IPI) P12063 (/IPI) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
2 | P00952 (/IDA) P00952 (/IDA) |
TRNA binding GO:0000049
Interacting selectively and non-covalently with transfer RNA.
|
1 | Q8BYL4 (/ISO) |
TRNA binding GO:0000049
Interacting selectively and non-covalently with transfer RNA.
|
1 | Q9Y2Z4 (/TAS) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
1 | Q9Y2Z4 (/HDA) |
Tyrosine-tRNA ligase activity GO:0004831
Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H(+).
|
1 | Q9Y2Z4 (/NAS) |
Tyrosine-tRNA ligase activity GO:0004831
Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H(+).
|
1 | Q9W107 (/TAS) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
1 | O74890 (/ISM) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
1 | Q9Y2Z4 (/TAS) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
1 | Q9Y2Z4 (/IPI) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
1 | Q8BYL4 (/ISO) |
Tyrosine binding GO:0072545
Interacting selectively and non-covalently with2-amino-3-(4-hydroxyphenyl)propanoic acid.
|
1 | Q9Y2Z4 (/IDA) |
Tyrosine binding GO:0072545
Interacting selectively and non-covalently with2-amino-3-(4-hydroxyphenyl)propanoic acid.
|
1 | Q8BYL4 (/ISO) |
There are 18 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Tyrosyl-tRNA aminoacylation GO:0006437
The process of coupling tyrosine to tyrosyl-tRNA, catalyzed by tyrosyl-tRNA synthetase.The tyrosyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a tyrosine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.T
|
102 |
P00952 (/IDA)
P00952 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
(92 more) |
Tyrosyl-tRNA aminoacylation GO:0006437
The process of coupling tyrosine to tyrosyl-tRNA, catalyzed by tyrosyl-tRNA synthetase.The tyrosyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a tyrosine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.T
|
5 | O74890 (/ISS) Q54WD9 (/ISS) Q9KUQ0 (/ISS) Q9KUQ0 (/ISS) Q9KUQ0 (/ISS) |
Mitochondrial tyrosyl-tRNA aminoacylation GO:0070184
The process of coupling tyrosine to tyrosyl-tRNA in a mitochondrion, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
|
5 | P48527 (/IGI) P48527 (/IGI) P48527 (/IGI) P48527 (/IGI) P48527 (/IGI) |
Group I intron splicing GO:0000372
The splicing of Group I introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group I introns and involved in determining the locations of the splice sites (there do not appear to be consensus splice site sequences) as well as having a role in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions, generally with exogenous guanosine as the initiating nucleophile. The intron is excised as a linear piece (though it may subsequently circularize).
|
2 | P12063 (/IDA) P12063 (/IDA) |
Embryo development ending in seed dormancy GO:0009793
The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
|
2 | Q9M876 (/IMP) Q9M876 (/IMP) |
Positive regulation of RNA splicing GO:0033120
Any process that activates or increases the frequency, rate or extent of RNA splicing.
|
2 | P12063 (/IDA) P12063 (/IDA) |
RNA folding GO:0034337
The process of assisting in the covalent and noncovalent assembly of single or multimeric RNAs into the correct tertiary structure.
|
2 | P12063 (/IDA) P12063 (/IDA) |
Regulation of protein complex stability GO:0061635
Any process that affects the structure and integrity of a protein complex by altering the likelihood of its assembly or disassembly.
|
2 | P00952 (/IMP) P00952 (/IMP) |
Mitochondrial tyrosyl-tRNA aminoacylation GO:0070184
The process of coupling tyrosine to tyrosyl-tRNA in a mitochondrion, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
|
2 | Q59WU2 (/ISO) Q8BYL4 (/ISO) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
1 | Q9Y2Z4 (/NAS) |
TRNA aminoacylation for protein translation GO:0006418
The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis.
|
1 | Q9Y2Z4 (/TAS) |
Tyrosyl-tRNA aminoacylation GO:0006437
The process of coupling tyrosine to tyrosyl-tRNA, catalyzed by tyrosyl-tRNA synthetase.The tyrosyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a tyrosine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.T
|
1 | Q9W107 (/TAS) |
Mitochondrial translation GO:0032543
The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the mitochondrion has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code.
|
1 | O74890 (/NAS) |
TRNA aminoacylation GO:0043039
The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules.
|
1 | Q9Y2Z4 (/IDA) |
TRNA aminoacylation GO:0043039
The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules.
|
1 | Q8BYL4 (/ISO) |
Mitochondrial tyrosyl-tRNA aminoacylation GO:0070184
The process of coupling tyrosine to tyrosyl-tRNA in a mitochondrion, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
|
1 | Q9Y2Z4 (/IC) |
Mitochondrial tyrosyl-tRNA aminoacylation GO:0070184
The process of coupling tyrosine to tyrosyl-tRNA in a mitochondrion, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
|
1 | Q9Y2Z4 (/IMP) |
Mitochondrial tyrosyl-tRNA aminoacylation GO:0070184
The process of coupling tyrosine to tyrosyl-tRNA in a mitochondrion, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
|
1 | Q9W107 (/ISS) |
There are 20 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
100 |
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
(90 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
100 |
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
P0AGJ9 (/IDA)
(90 more) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
100 |
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
P0AGJ9 (/HDA)
(90 more) |
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
9 | P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
9 | P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) P9WFT1 (/HDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
7 | O74890 (/HDA) P48527 (/HDA) P48527 (/HDA) P48527 (/HDA) P48527 (/HDA) P48527 (/HDA) Q8BYL4 (/HDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
5 | P48527 (/IMP) P48527 (/IMP) P48527 (/IMP) P48527 (/IMP) P48527 (/IMP) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
3 | Q9M876 (/IDA) Q9M876 (/IDA) Q9Y2Z4 (/IDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
2 | Q59WU2 (/ISO) Q8BYL4 (/ISO) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
2 | Q54WD9 (/ISS) Q9W107 (/ISS) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
2 | Q9W107 (/TAS) Q9Y2Z4 (/TAS) |
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
|
2 | Q9M876 (/IDA) Q9M876 (/IDA) |
Chloroplast stroma GO:0009570
The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.
|
2 | Q9M876 (/IDA) Q9M876 (/IDA) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
2 | P00952 (/IDA) P00952 (/IDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
1 | Q9Y2Z4 (/IC) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
1 | Q9Y2Z4 (/NAS) |
Mitochondrial matrix GO:0005759
The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
|
1 | O74890 (/IC) |
Mitochondrial matrix GO:0005759
The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
|
1 | Q9Y2Z4 (/TAS) |
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
|
1 | Q9Y2Z4 (/IDA) |
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
|
1 | Q8BYL4 (/ISO) |