The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"GidA associated domain, C-terminal subdomain
".
FunFam 1: tRNA uridine 5-carboxymethylaminomethyl modificati...
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 5 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
108 |
O13670 (/IPI)
P0A6U3 (/IPI)
P0A6U3 (/IPI)
P0A6U3 (/IPI)
P0A6U3 (/IPI)
P0A6U3 (/IPI)
P0A6U3 (/IPI)
P0A6U3 (/IPI)
P0A6U3 (/IPI)
P0A6U3 (/IPI)
(98 more) |
|
Flavin adenine dinucleotide binding GO:0050660
Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
|
107 |
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
(97 more) |
|
Flavin adenine dinucleotide binding GO:0050660
Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
|
3 | Q9HT09 (/ISS) Q9HT09 (/ISS) Q9HT09 (/ISS) |
|
Transferase activity GO:0016740
Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
|
2 | P53070 (/TAS) P53070 (/TAS) |
|
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
1 | Q9Y2Z2 (/HDA) |
There are 12 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
TRNA wobble uridine modification GO:0002098
The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified.
|
107 |
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
(97 more) |
|
TRNA wobble uridine modification GO:0002098
The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified.
|
107 |
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
(97 more) |
|
Response to UV GO:0009411
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.
|
107 |
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
(97 more) |
|
TRNA methylation GO:0030488
The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule.
|
107 |
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
P0A6U3 (/IMP)
(97 more) |
|
TRNA wobble uridine modification GO:0002098
The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified.
|
3 | Q9HT09 (/ISS) Q9HT09 (/ISS) Q9HT09 (/ISS) |
|
TRNA methylation GO:0030488
The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule.
|
3 | Q9HT09 (/ISS) Q9HT09 (/ISS) Q9HT09 (/ISS) |
|
TRNA modification GO:0006400
The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically.
|
2 | P53070 (/TAS) P53070 (/TAS) |
|
Mitochondrial tRNA wobble uridine modification GO:0070899
The process in which a uridine in position 34 of a mitochondrial tRNA is post-transcriptionally modified.
|
2 | P53070 (/IMP) P53070 (/IMP) |
|
TRNA wobble uridine modification GO:0002098
The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified.
|
1 | Q923Z3 (/IGI) |
|
TRNA wobble uridine modification GO:0002098
The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified.
|
1 | O13670 (/ISO) |
|
Mitochondrial translation GO:0032543
The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the mitochondrion has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code.
|
1 | O13670 (/ISO) |
|
Mitochondrial tRNA wobble uridine modification GO:0070899
The process in which a uridine in position 34 of a mitochondrial tRNA is post-transcriptionally modified.
|
1 | Q923Z3 (/IGI) |
There are 6 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
107 |
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
P0A6U3 (/IDA)
(97 more) |
|
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
4 | O13670 (/HDA) P53070 (/HDA) P53070 (/HDA) Q923Z3 (/HDA) |
|
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
3 | P53070 (/IDA) P53070 (/IDA) Q923Z3 (/IDA) |
|
Mitochondrial matrix GO:0005759
The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
|
2 | P53070 (/TAS) P53070 (/TAS) |
|
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
1 | Q923Z3 (/ISO) |
|
Mitochondrial matrix GO:0005759
The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
|
1 | O13670 (/IC) |
