The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:

"
Translation initiation factor 2; subunit 1; domain 2
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 2: Translation initiation factor 2, alpha subunit

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 3 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
10 P20459 (/IPI) P20459 (/IPI) P20459 (/IPI) P20459 (/IPI) P20459 (/IPI) P20459 (/IPI) P20459 (/IPI) P20459 (/IPI) P20459 (/IPI) P56286 (/IPI)
Translation initiation factor activity GO:0003743
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
9 P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS)
Translation initiation factor activity GO:0003743
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
1 P56286 (/ISO)

There are 4 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Formation of translation preinitiation complex GO:0001731
The joining of the small ribosomal subunit, ternary complex, and mRNA.
9 P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA)
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
9 P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS)
Cytoplasmic translational initiation GO:0002183
The process preceding formation of the peptide bond between the first two amino acids of a protein in the cytoplasm. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
1 P56286 (/ISO)
Mitotic G1 DNA damage checkpoint GO:0031571
A mitotic cell cycle checkpoint that detects and negatively regulates progression through the G1/S transition of the cell cycle in response to DNA damage.
1 P56286 (/IMP)

There are 8 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
9 P20459 (/HDA) P20459 (/HDA) P20459 (/HDA) P20459 (/HDA) P20459 (/HDA) P20459 (/HDA) P20459 (/HDA) P20459 (/HDA) P20459 (/HDA)
Ribosome GO:0005840
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
9 P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS) P20459 (/TAS)
Eukaryotic translation initiation factor 2 complex GO:0005850
Complex of three heterogeneous polypeptide chains, that form a ternary complex with initiator methionyl-tRNA and GTP. This ternary complex binds to free 40S subunit, which subsequently binds the 5' end of mRNA.
9 P20459 (/IMP) P20459 (/IMP) P20459 (/IMP) P20459 (/IMP) P20459 (/IMP) P20459 (/IMP) P20459 (/IMP) P20459 (/IMP) P20459 (/IMP)
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
9 P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA)
Eukaryotic 48S preinitiation complex GO:0033290
A protein complex composed of the small ribosomal subunit, eIF3, eIF1A, methionyl-initiatior methionine and a capped mRNA. The complex is initially positioned at the 5'-end of the capped mRNA.
9 P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA)
Multi-eIF complex GO:0043614
A multifactor complex composed of multiple translation initiation factors and the initiatior tRNAiMet, which is ready to bind to the small (40S) ribosome to form the 43S preinitiation complex. In S. cerevisiae, this complex is composed of eIF1, eIF2, eIF3, and eIF5.
9 P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA) P20459 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 P56286 (/HDA)
Eukaryotic translation initiation factor 2 complex GO:0005850
Complex of three heterogeneous polypeptide chains, that form a ternary complex with initiator methionyl-tRNA and GTP. This ternary complex binds to free 40S subunit, which subsequently binds the 5' end of mRNA.
1 P56286 (/ISO)
CATH-Gene3D is a Global Biodata Core Resource Learn more...