The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Met repressor-like
".
FunFam 3: Arc family DNA-binding protein
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 11 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Bacterial-type proximal promoter sequence-specific DNA binding GO:0000986
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a bacterial gene (or cistron, or operon). The proximal promoter is in cis with and relatively close to the core promoter.
|
26 |
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
(16 more) |
Bacterial-type RNA polymerase enhancer sequence-specific DNA binding GO:0001150
Interacting selectively and non-covalently with a sequence of DNA that is an enhancer region that helps activate transcription of a gene or operon by a bacterial-type RNA polymerase. Enhancers for sigma-54 holoenzymes are typically located 80 to 150 base pairs upstream from the transcription start site, although they can be further away or may be downstream of the promoter. Some transcription units dependent on sigma-70 holoenzymes may also include enhancer sequences.
|
26 |
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
(16 more) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
26 |
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
(16 more) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
26 |
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
(16 more) |
Transcription regulatory region sequence-specific DNA binding GO:0000976
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
|
13 |
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
(3 more) |
Transcription regulatory region sequence-specific DNA binding GO:0000976
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
|
13 |
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
(3 more) |
DNA-binding transcription repressor activity GO:0001217
Interacting selectively and non-covalently with a specific DNA sequence in order to stop, prevent, or reduce the frequency, rate or extent of transcription by a RNA polymerase.
|
13 |
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
(3 more) |
DNA-binding transcription repressor activity GO:0001217
Interacting selectively and non-covalently with a specific DNA sequence in order to stop, prevent, or reduce the frequency, rate or extent of transcription by a RNA polymerase.
|
13 |
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
G3XCY4 (/IPI)
(3 more) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
13 |
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
(3 more) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
13 |
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
(3 more) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
13 |
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
(3 more) |
There are 11 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Pathogenesis GO:0009405
The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
|
26 |
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
(16 more) |
Regulation of polysaccharide biosynthetic process GO:0032885
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides.
|
26 |
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
(16 more) |
Type IV pilus-dependent motility GO:0043107
Any process involved in the controlled movement of a bacterial cell which is dependent on the presence of type IV pili. Includes social gliding motility and twitching motility.
|
26 |
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
(16 more) |
Bacterial-type flagellum assembly GO:0044780
The assembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.
|
26 |
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
(16 more) |
Negative regulation of single-species biofilm formation on inanimate substrate GO:1900232
Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation on inanimate substrate.
|
26 |
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
(16 more) |
Positive regulation of single-species biofilm formation on inanimate substrate GO:1900233
Any process that activates or increases the frequency, rate or extent of single-species biofilm formation on inanimate substrate.
|
26 |
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
(16 more) |
Negative regulation of bacterial-type flagellum-dependent cell motility GO:1902201
Any process that stops, prevents or reduces the frequency, rate or extent of bacterial-type flagellum-dependent cell motility.
|
26 |
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
(16 more) |
Positive regulation of cell motility GO:2000147
Any process that activates or increases the frequency, rate or extent of cell motility.
|
26 |
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
G3XCY4 (/IMP)
(16 more) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
20 |
G8Q5R9 (/IMP)
G8Q5R9 (/IMP)
G8Q5R9 (/IMP)
G8Q5R9 (/IMP)
G8Q5R9 (/IMP)
G8Q5R9 (/IMP)
G8Q5R9 (/IMP)
G8Q5R9 (/IMP)
G8Q5R9 (/IMP)
G8Q5R9 (/IMP)
(10 more) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
13 |
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
G3XCY4 (/EXP)
(3 more) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
13 |
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
G3XCY4 (/IDA)
(3 more) |
There are 4 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.