The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Homeodomain-like
".
FunFam 39: MYB transcription factor
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 2 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
12 |
F4KE69 (/ISS)
Q8GWP0 (/ISS)
Q9FJP2 (/ISS)
Q9LDI5 (/ISS)
Q9LDR8 (/ISS)
Q9M0J5 (/ISS)
Q9M0J5 (/ISS)
Q9M0Y5 (/ISS)
Q9S9Z2 (/ISS)
Q9SBF3 (/ISS)
(2 more) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
6 | Q9FJP2 (/IPI) Q9M0J5 (/IPI) Q9M0J5 (/IPI) Q9S9Z2 (/IPI) Q9SBF3 (/IPI) Q9SBF3 (/IPI) |
There are 17 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Response to abscisic acid GO:0009737
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
|
7 | F4KE69 (/IEP) Q9LDR8 (/IEP) Q9M0J5 (/IEP) Q9M0J5 (/IEP) Q9M0Y5 (/IEP) Q9S9Z2 (/IEP) Q9SPG6 (/IEP) |
|
Response to salicylic acid GO:0009751
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.
|
5 | Q9LDI5 (/IEP) Q9S9Z2 (/IEP) Q9SBF3 (/IEP) Q9SBF3 (/IEP) Q9SPG6 (/IEP) |
|
Response to salt stress GO:0009651
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
|
3 | Q9LDR8 (/IEP) Q9M0Y5 (/IEP) Q9SPG6 (/IEP) |
|
Response to jasmonic acid GO:0009753
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
|
3 | Q9M0Y5 (/IEP) Q9SBF3 (/IEP) Q9SBF3 (/IEP) |
|
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
2 | Q9LDR8 (/TAS) Q9SPG6 (/TAS) |
|
Multidimensional cell growth GO:0009825
The process in which a cell irreversibly increases in size in two or three
|
2 | Q9M0J5 (/IMP) Q9M0J5 (/IMP) |
|
Response to chitin GO:0010200
A process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
|
2 | Q9M0J5 (/IEP) Q9M0J5 (/IEP) |
|
Cuticle development GO:0042335
The chemical reactions and pathways resulting in the formation of a cuticle, the outer layer of some animals and plants, which acts to prevent water loss.
|
2 | Q9M0J5 (/IMP) Q9M0J5 (/IMP) |
|
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
2 | Q9M0J5 (/IMP) Q9M0J5 (/IMP) |
|
Regulation of primary metabolic process GO:0080090
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism involving those compounds formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
|
2 | Q9M0J5 (/IMP) Q9M0J5 (/IMP) |
|
Regulation of raffinose metabolic process GO:0080091
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving raffinose.
|
2 | Q9M0J5 (/IMP) Q9M0J5 (/IMP) |
|
Response to osmotic stress GO:0006970
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
|
1 | Q9LDR8 (/IEP) |
|
Response to wounding GO:0009611
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
|
1 | Q9LDR8 (/IEP) |
|
Response to ethylene GO:0009723
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.
|
1 | Q9M0Y5 (/IEP) |
|
Response to auxin GO:0009733
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
|
1 | Q9S9Z2 (/IEP) |
|
Cellular response to auxin stimulus GO:0071365
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
|
1 | Q9S9Z2 (/IEP) |
|
Negative regulation of lateral root development GO:1901332
Any process that stops, prevents or reduces the frequency, rate or extent of lateral root development.
|
1 | Q9S9Z2 (/IMP) |
There are 2 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q9S9Z2 (/IDA) |
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
1 | Q9S9Z2 (/IDA) |
