The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Ribosomal protein L11, C-terminal domain
".
FunFam 1: 50S ribosomal protein L11
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
281 |
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
(271 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
281 |
P0A7J7 (/IPI)
P0A7J7 (/IPI)
P0A7J7 (/IPI)
P0A7J7 (/IPI)
P0A7J7 (/IPI)
P0A7J7 (/IPI)
P0A7J7 (/IPI)
P0A7J7 (/IPI)
P0A7J7 (/IPI)
P0A7J7 (/IPI)
(271 more) |
RRNA binding GO:0019843
Interacting selectively and non-covalently with ribosomal RNA.
|
281 |
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
(271 more) |
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
22 |
P0A463 (/IMP)
P0A463 (/IMP)
P0A463 (/IMP)
P0A463 (/IMP)
P0A463 (/IMP)
P0A463 (/IMP)
P0A463 (/IMP)
P0A463 (/IMP)
P0A463 (/IMP)
P0A463 (/IMP)
(12 more) |
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
9 | Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) |
Large ribosomal subunit rRNA binding GO:0070180
Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
|
1 | P56210 (/IMP) |
There are 5 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Ribosomal large subunit assembly GO:0000027
The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit.
|
281 |
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
(271 more) |
Translational termination GO:0006415
The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).
|
281 |
P0A7J7 (/IMP)
P0A7J7 (/IMP)
P0A7J7 (/IMP)
P0A7J7 (/IMP)
P0A7J7 (/IMP)
P0A7J7 (/IMP)
P0A7J7 (/IMP)
P0A7J7 (/IMP)
P0A7J7 (/IMP)
P0A7J7 (/IMP)
(271 more) |
Stringent response GO:0015968
A specific global change in the metabolism of a bacterial cell (the downregulation of nucleic acid and protein synthesis, and the simultaneous upregulation of protein degradation and amino acid synthesis) as a result of starvation.
|
281 |
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
(271 more) |
Ribosome biogenesis GO:0042254
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
|
15 |
Q5HVZ3 (/ISS)
Q5HVZ3 (/ISS)
Q5HVZ3 (/ISS)
Q5HVZ3 (/ISS)
Q5HVZ3 (/ISS)
Q5HVZ3 (/ISS)
Q5HVZ3 (/ISS)
Q5HVZ3 (/ISS)
Q5HVZ3 (/ISS)
Q5HVZ3 (/ISS)
(5 more) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
9 | Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) |
There are 10 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
284 |
O51354 (/IDA)
O51354 (/IDA)
O51354 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
(274 more) |
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
281 |
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
P0A7J7 (/IDA)
(271 more) |
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
14 |
P9WHE5 (/HDA)
P9WHE5 (/HDA)
P9WHE5 (/HDA)
P9WHE5 (/HDA)
P9WHE5 (/HDA)
P9WHE5 (/HDA)
P9WHE5 (/HDA)
P9WHE5 (/HDA)
P9WHE5 (/HDA)
P9WHE5 (/HDA)
(4 more) |
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
9 | Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) Q9KV34 (/ISS) |
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
|
2 | Q9MAP3 (/IDA) Q9MAP3 (/IDA) |
Chloroplast stroma GO:0009570
The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.
|
2 | Q9MAP3 (/IDA) Q9MAP3 (/IDA) |
Chloroplast envelope GO:0009941
The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.
|
2 | Q9MAP3 (/IDA) Q9MAP3 (/IDA) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
2 | Q9MAP3 (/IDA) Q9MAP3 (/IDA) |
Cytosolic ribosome GO:0022626
A ribosome located in the cytosol.
|
2 | Q9MAP3 (/IDA) Q9MAP3 (/IDA) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
1 | P56210 (/IMP) |