CATH Superfamily 1.10.10.1410
The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 1: 60S acidic ribosomal protein P1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 8 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
42 |
O23095 (/IDA)
O23095 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
(32 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
42 |
P05386 (/IPI)
P05386 (/IPI)
P05386 (/IPI)
P05386 (/IPI)
P05386 (/IPI)
P05386 (/IPI)
P05386 (/IPI)
P05386 (/IPI)
P05386 (/IPI)
P05386 (/IPI)
(32 more) |
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
34 |
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
(24 more) |
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
7 | P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) P52855 (/TAS) |
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
6 | P08570 (/HDA) P08570 (/HDA) P08570 (/HDA) P08570 (/HDA) P08570 (/HDA) P08570 (/HDA) |
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
3 | P17476 (/ISO) P17477 (/ISO) Q9UU78 (/ISO) |
Ribonucleoprotein complex binding GO:0043021
Interacting selectively and non-covalently with any complex of RNA and protein.
|
1 | P19944 (/IPI) |
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
|
1 | P52855 (/IDA) |
There are 13 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
|
34 |
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
(24 more) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
34 |
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
P05386 (/NAS)
(24 more) |
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
|
34 |
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
(24 more) |
SRP-dependent cotranslational protein targeting to membrane GO:0006614
The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
|
34 |
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
(24 more) |
Viral transcription GO:0019083
The process by which a viral genome, or part of a viral genome, is transcribed within the host cell.
|
34 |
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
(24 more) |
Cytoplasmic translation GO:0002181
The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
|
6 | P08570 (/IC) P08570 (/IC) P08570 (/IC) P08570 (/IC) P08570 (/IC) P08570 (/IC) |
Cytoplasmic translation GO:0002181
The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
|
6 | P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) |
Cytoplasmic translational elongation GO:0002182
The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in the cytoplasm.
|
3 | P17476 (/ISO) P17477 (/ISO) Q9UU78 (/ISO) |
Erythrocyte differentiation GO:0030218
The process in which a myeloid precursor cell acquires specializes features of an erythrocyte.
|
3 | E9QHS9 (/IMP) Q6P5K5 (/IMP) Q6Q414 (/IMP) |
Regulation of translation GO:0006417
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
|
2 | P47955 (/IMP) P47955 (/IMP) |
Positive regulation of translation GO:0045727
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
|
1 | P19944 (/IDA) |
Cellular response to cAMP GO:0071320
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus.
|
1 | P19944 (/IEP) |
Cellular response to Thyroid stimulating hormone GO:1904401
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Thyroid stimulating hormone stimulus.
|
1 | P19944 (/IEP) |
There are 14 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
36 |
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
P05386 (/IDA)
(26 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
34 |
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
P05386 (/TAS)
(24 more) |
Focal adhesion GO:0005925
Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
|
34 |
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
(24 more) |
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
34 |
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
P05386 (/HDA)
(24 more) |
Cytosolic ribosome GO:0022626
A ribosome located in the cytosol.
|
8 | O23095 (/IDA) O23095 (/IDA) Q8LCW9 (/IDA) Q8LCW9 (/IDA) Q8LEQ0 (/IDA) Q8LEQ0 (/IDA) Q9FLV1 (/IDA) Q9FLV1 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
6 | O23095 (/IDA) O23095 (/IDA) Q8LCW9 (/IDA) Q8LCW9 (/IDA) Q8LEQ0 (/IDA) Q8LEQ0 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
6 | O23095 (/IDA) O23095 (/IDA) Q8LCW9 (/IDA) Q8LCW9 (/IDA) Q8LEQ0 (/IDA) Q8LEQ0 (/IDA) |
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
6 | P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) P08570 (/TAS) |
Cytosolic ribosome GO:0022626
A ribosome located in the cytosol.
|
6 | P08570 (/HDA) P08570 (/HDA) P08570 (/HDA) P08570 (/HDA) P08570 (/HDA) P08570 (/HDA) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
4 | Q8LCW9 (/IDA) Q8LCW9 (/IDA) Q8LEQ0 (/IDA) Q8LEQ0 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
3 | P17476 (/HDA) P17477 (/HDA) Q9UU78 (/HDA) |
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
3 | P17476 (/ISO) P17477 (/ISO) Q9UU78 (/ISO) |
Polysomal ribosome GO:0042788
A ribosome bound to mRNA that forms part of a polysome.
|
2 | Q8LCW9 (/IDA) Q8LCW9 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q9UU78 (/HDA) |