The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Transcriptional regulator DELLA, N-terminal domain
".
FunFam 1: DELLA protein GAI
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 10 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
7 | Q7G7J6 (/IPI) Q8GXW1 (/IPI) Q8GXW1 (/IPI) Q9C8Y3 (/IPI) Q9LF53 (/IPI) Q9LQT8 (/IPI) Q9SLH3 (/IPI) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
6 | Q8GXW1 (/ISS) Q8GXW1 (/ISS) Q9C8Y3 (/ISS) Q9LF53 (/ISS) Q9LQT8 (/ISS) Q9SLH3 (/ISS) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
6 | Q8GXW1 (/TAS) Q8GXW1 (/TAS) Q9C8Y3 (/TAS) Q9LF53 (/TAS) Q9LQT8 (/TAS) Q9SLH3 (/TAS) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
2 | Q8GXW1 (/IDA) Q8GXW1 (/IDA) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
1 | Q9SLH3 (/IDA) |
Transcription coactivator activity GO:0003713
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to activate the transcription of specific genes. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. Another type of coregulator activity is the bridging of a DNA-binding transcription factor to the basal transcription machinery. The Mediator complex, which bridges transcription factors and RNA polymerase, is also a transcription coactivator.
|
1 | Q9LQT8 (/IDA) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
1 | Q9SLH3 (/IPI) |
Transcription regulatory region DNA binding GO:0044212
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
1 | Q9SLH3 (/IPI) |
Promoter-specific chromatin binding GO:1990841
Interacting selectively and non-covalently with a section of chromatin that is associated with gene promoter sequences of DNA.
|
1 | Q9SLH3 (/IDA) |
Promoter-specific chromatin binding GO:1990841
Interacting selectively and non-covalently with a section of chromatin that is associated with gene promoter sequences of DNA.
|
1 | Q9SLH3 (/IPI) |
There are 33 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Gibberellic acid mediated signaling pathway GO:0009740
A series of molecular signals mediated by the detection of gibberellic acid.
|
6 | Q8GXW1 (/TAS) Q8GXW1 (/TAS) Q9C8Y3 (/TAS) Q9LF53 (/TAS) Q9LQT8 (/TAS) Q9SLH3 (/TAS) |
Response to gibberellin GO:0009739
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
|
5 | Q8GXW1 (/IEP) Q8GXW1 (/IEP) Q9C8Y3 (/IEP) Q9LF53 (/IEP) Q9LQT8 (/IEP) |
Negative regulation of gibberellic acid mediated signaling pathway GO:0009938
Any process that stops, prevents, or reduces the frequency, rate or extent of gibberellic acid mediated signaling activity.
|
3 | Q8GXW1 (/TAS) Q8GXW1 (/TAS) Q9LQT8 (/TAS) |
Response to abscisic acid GO:0009737
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
|
2 | Q8GXW1 (/IEP) Q8GXW1 (/IEP) |
Response to gibberellin GO:0009739
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
|
2 | Q9LQT8 (/IGI) Q9SLH3 (/IGI) |
Response to gibberellin GO:0009739
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
|
2 | Q9LQT8 (/IMP) Q9SLH3 (/IMP) |
Negative regulation of gibberellic acid mediated signaling pathway GO:0009938
Any process that stops, prevents, or reduces the frequency, rate or extent of gibberellic acid mediated signaling activity.
|
2 | Q9LQT8 (/IGI) Q9SLH3 (/IGI) |
Negative regulation of gibberellic acid mediated signaling pathway GO:0009938
Any process that stops, prevents, or reduces the frequency, rate or extent of gibberellic acid mediated signaling activity.
|
2 | Q9C8Y3 (/IMP) Q9LQT8 (/IMP) |
Negative regulation of seed germination GO:0010187
Any process that stops, prevents, or reduces the frequency, rate or extent of seed germination.
|
2 | Q8GXW1 (/IMP) Q8GXW1 (/IMP) |
Response to far red light GO:0010218
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
|
2 | Q9LQT8 (/IEP) Q9SLH3 (/IEP) |
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
2 | Q9LQT8 (/IGI) Q9SLH3 (/IGI) |
Meiotic cytokinesis GO:0033206
A cell cycle process that results in the division of the cytoplasm of a cell after meiosis, resulting in the separation of the original cell into two daughter cells.
|
2 | Q9LQT8 (/IMP) Q9SLH3 (/IMP) |
Negative regulation of trichome patterning GO:1900033
Any process that stops, prevents or reduces the frequency, rate or extent of trichome patterning.
|
2 | Q9LQT8 (/IGI) Q9SLH3 (/IGI) |
Negative regulation of developmental vegetative growth GO:1905614
Any process that stops, prevents or reduces the frequency, rate or extent of developmental vegetative growth.
|
2 | Q9LQT8 (/IGI) Q9SLH3 (/IGI) |
Negative regulation of leaf development GO:1905622
Any process that stops, prevents or reduces the frequency, rate or extent of leaf development.
|
2 | Q9LQT8 (/IGI) Q9SLH3 (/IGI) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q84TQ7 (/IDA) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q9SLH3 (/TAS) |
Regulation of nitrogen utilization GO:0006808
Any process that modulates the frequency, rate or extent of nitrogen utilization.
|
1 | Q9LQT8 (/IMP) |
Response to gibberellin GO:0009739
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
|
1 | Q84TQ7 (/IDA) |
Response to gibberellin GO:0009739
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
|
1 | Q9LF53 (/ISS) |
Gibberellic acid mediated signaling pathway GO:0009740
A series of molecular signals mediated by the detection of gibberellic acid.
|
1 | Q84TQ7 (/IDA) |
Positive regulation of gibberellic acid mediated signaling pathway GO:0009939
Any process that activates or increases the frequency, rate or extent of gibberellic acid mediated signaling activity.
|
1 | Q9LQT8 (/IDA) |
Phloem transport GO:0010233
The directed movement of substances, into, out of or within the phloem during long distance transport between source and sink tissues.
|
1 | Q9LQT8 (/IMP) |
Gibberellic acid homeostasis GO:0010336
Any biological process involved in the maintenance of an internal steady state of gibberellic acid; may involve transport, biosynthesis, catabolism or conjugation.
|
1 | Q9LQT8 (/IDA) |
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
1 | Q9SLH3 (/IMP) |
Negative regulation of gene expression GO:0010629
Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
1 | Q9LQT8 (/IMP) |
Regulation of protein catabolic process GO:0042176
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
|
1 | Q9SLH3 (/IMP) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q9SLH3 (/IDA) |
Seed trichome elongation GO:0090378
The process in which a seed trichome irreversibly increases in size in one
|
1 | Q84TQ7 (/IDA) |
Negative regulation of trichome patterning GO:1900033
Any process that stops, prevents or reduces the frequency, rate or extent of trichome patterning.
|
1 | Q9SLH3 (/IMP) |
Positive regulation of nucleic acid-templated transcription GO:1903508
Any process that activates or increases the frequency, rate or extent of nucleic acid-templated transcription.
|
1 | Q9LQT8 (/IDA) |
Negative regulation of leaf development GO:1905622
Any process that stops, prevents or reduces the frequency, rate or extent of leaf development.
|
1 | Q9SLH3 (/IMP) |
Positive regulation of signaling receptor activity GO:2000273
Any process that activates or increases the frequency, rate or extent of signaling receptor activity.
|
1 | Q84TQ7 (/IDA) |
There are 3 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
7 | Q7G7J6 (/IDA) Q84TQ7 (/IDA) Q8GXW1 (/IDA) Q8GXW1 (/IDA) Q9C8Y3 (/IDA) Q9LQT8 (/IDA) Q9SLH3 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
6 | Q8GXW1 (/TAS) Q8GXW1 (/TAS) Q9C8Y3 (/TAS) Q9LF53 (/TAS) Q9LQT8 (/TAS) Q9SLH3 (/TAS) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q9LQT8 (/ISS) |